Sensor Protein Cpxa

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Sensor Protein Cpxa
  Conformer 1
(PDB) 		4biu (A)
  Conformer 2
(PDB) 		4bix (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 132 0.96   305 - 400   418 - 453
2 70 2.63   242 - 304   401 - 407

Sequence


           ____________________________________________________________________________________________________________304_________ 
 4biu(A) : KPARKLKNAADEVAQGNLRQHPEeFLAAGASFNQMVTALERMMTSQQRLLSDISHELRTPLTRLQLGTALLRRRSGESKELERIETEAQRLDSMINDLLVMSRNQQKNALVSETIKANQL 
         :                                                                                                                          
 4bix(A) : **************************AAGASFNQVVTALERMMTSQQRLLSDISHELRTPLTRLQLGTALLRRRSGESKELERIETEAQRLDSMINDLLVMSRNQQKNALVSETIKANQL 
           ____________________________________________________________________________________________________________304_________ 

           ___________________________________________________________________________________399___405____________________________ 
 4biu(A) : WSEVLDNAAFEAEQMGKSLTVNFPPGPWPLYGNPNALESALENIVRNALRYSHTKIEVGFAVDKDGITITVDDDGPGVSPEDREQIFRPFYRTDg--LGLAIVETAIQQHRGWVKAEDSP 
         :                                                                                                                          
 4bix(A) : WSEVLDNAAFEAEQMGKSLTVNFPPGPWPLYGNPNALESALENIVRNALRYSHTKIEVGFAVDKDGITITVDDDGPGVSPEDREQIFRPFYRTDgTGLGLAIVETAIQQHRGWVKAEDSP 
           ___________________________________________________________________________________399___405____________________________ 

           _______________                                                                                                          
 4biu(A) : LGGLRLVIWLPLYK*                                                                                                          
         :                                                                                                                          
 4bix(A) : LGGLRLVIWLPLYKR                                                                                                          
           _______________                                                                                                          

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		29.1
Translation
(A) 		0.3
Closure
(%) 		96.2
Bending Residues
( green ) 		  304 - 306
  399 - 401
  405 - 422
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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