Alpha1,3-Fucosyltransferase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Alpha1,3-Fucosyltransferase
  Conformer 1
(PDB) 		2nzx (A)
  Conformer 2
(PDB) 		2nzy (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 314 0.79   3 - 28   47 - 60   63 - 346
2 20 0.92   29 - 46   61 - 62

Sequence


           __________________________28________________46____________60____________________________________________________________ 
 2nzx(A) : MFQPLLDAYVESASIEKMASKSPPPLKIAVANWWGDEEIKEFKNSVLYFILSQRYTITLHQNPNEFSDLVFGNPyQNAKRVFYTGENESPNFNLFDYAIGFDELDFNDRYLRMPLYYDRL 
         :                                                                                                                          
 2nzy(B) : MFQPLLDAYVESASIEKMASKSPPPLKIAVANWWGDEEIKEFKNSVLYFILSQRYTITLHQNPNEFSDLVFGNP-qNAKRVFYTGENESPNFNLFDYAIGFDELDFNDRYLRMPLYYDRL 
           __________________________28________________46____________60____________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 2nzx(A) : HHKAESVNDTTAPYKLKDNSLYALKKPSHCFKEKHPNLCAVVNDESDPLKRGFASFVASNPNAPIRNAFYDALNSIEPVTGGGSVRNTLGYNVKNKNEFLSQYKFNLCFENTQGYGYVTE 
         :                                                                                                                          
 2nzy(B) : HHKAESVNDTTAPYKLKDNSLYALKKPSHCFKEKHPNLCAVVNDESDPLKRGFASFVASNPNAPIRNAFYDALNSIEPVTGGGSVRNTLGYNVKNKNEFLSQYKFNLCFENTQGYGYVTE 
           ________________________________________________________________________________________________________________________ 

           ____________________________________________________________________________________________________                     
 2nzx(A) : KIIDAYFSHTIPIYWGSPSVAKDFNPKSFVNVHDFKNFDEAIDYIKYLHTHKNAYLDMLYENPLNTLDGKAYFYQNLSFKKILAFFKTILENDTIYHDNP                     
         :                                                                                                                          
 2nzy(B) : KIIDAYFSHTIPIYWGSPSVAKDFNPKSFVNVHDFKNFDEAIDYIKYLHTHKNAYLDMLYENPLNTLDGKAYFYQNLSFKKILAFFKTILENDTIYHDN*                     
           ____________________________________________________________________________________________________                     

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		24.4
Translation
(A) 		-0.7
Closure
(%) 		13.7
Bending Residues
( green ) 		  28 - 29
  46 - 47
  60 - 63
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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