Alpha1,3-Fucosyltransferase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Alpha1,3-Fucosyltransferase
  Conformer 1
(PDB) 		2nzw (A)
  Conformer 2
(PDB) 		2nzx (A)
  Window Length 15
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 301 0.47   8 - 186   212 - 342
2 25 0.94   187 - 211

Sequence


           ________________________________________________________________________________________________________________________ 
 2nzw(A) : MFQPLLDAYVESASIEKMASKSPPPLKIAVANWWGDEEIKEFKNSVLYFILSQRYTITLHQNPNEFSDLVFGNPLGSARKILSYQNAKRVFYTGENESPNFNLFDYAIGFDELDFNDRYL 
         :                                                                                                                          
 2nzx(A) : MFQPLLDAYVESASIEKMASKSPPPLKIAVANWWGDEEIKEFKNSVLYFILSQRYTITLHQNPNEFSDLVFGNP---------yQNAKRVFYTGENESPNFNLFDYAIGFDELDFNDRYL 
           ________________________________________________________________________________________________________________________ 

           ___________________________________________________________182__________________________211_____________________________ 
 2nzw(A) : RMPLYYDRLHHKAESVNDTTAPYKLKDNSLYALKKPSHCFKEKHPNLCAVVNDESDPLKRGFASFVASNPNAPIRNAFYDALNSIEPVTGGGSVRNTLGYNVKNKNEFLSQYKFNLCFEN 
         :                                                                                                                          
 2nzx(A) : RMPLYYDRLHHKAESVNDTTAPYKLKDNSLYALKKPSHCFKEKHPNLCAVVNDESDPLKRGFASFVASNPNAPIRNAFYDALNSIEPVTGGGSVRNTLGYNVKNKNEFLSQYKFNLCFEN 
           ___________________________________________________________182__________________________211_____________________________ 

           _____________________________________________________________________________________________________________            
 2nzw(A) : TQGYGYVTEKIIDAYFSHTIPIYWGSPSVAKDFNPKSFVNVHDFKNFDEAIDYIKYLHTHKNAYLDMLYENPLNTLDGKAYFYQNLSFKKILAFFKTILENDTIYHDNP            
         :                                                                                                                          
 2nzx(A) : TQGYGYVTEKIIDAYFSHTIPIYWGSPSVAKDFNPKSFVNVHDFKNFDEAIDYIKYLHTHKNAYLDMLYENPLNTLDGKAYFYQNLSFKKILAFFKTILENDTIYHDNP            
           _____________________________________________________________________________________________________________            

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		7.5
Translation
(A) 		-0.1
Closure
(%) 		80.6
Bending Residues
( green ) 		  182 - 187
  211 - 213
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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