Ketohexokinase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Ketohexokinase
  Conformer 1
(PDB) 		6p2d (A)
  Conformer 2
(PDB) 		5wbm (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 246 0.76   5 - 13   38 - 94   112 - 113   119 - 296
2 46 0.98   14 - 37   95 - 111   114 - 118

Sequence


           _______________13______________________37______________________________________________________93_______________111_____ 
 6p2d(A) : ******EKQILCVGLVVLDIINVVDKYPEEDTDRRCLSQRWQRGGNASNSCTVLSLLGARCAFMGSLAPGHVADFLVADFRQRGVDVSQVTWQSQGDTPCSCCIVNNSNGSRTIILYDTN 
         :                                                                                                                          
 5wbm(B) : SGLVPRGSQILCVGLVVLDVISLVDKYPKEDSEIRCLSQRWQRGGNASNSCTVLSLLGAPCAFMGSMAPGHVADFLVADFRRRGVDVSQVAWQSKGDTPSSCCIINNSNGNRTIVLHDTS 
           _______________13______________________37______________________________________________________93_______________111_____ 

           ________________________________________________________________________________________________________________________ 
 6p2d(A) : LPDVSAKDFEKVDLTRFKWIHIEGRNASEQVKMLQRIEEHNAKQPLPQKVRVSVEIEKPREELFQLFSYGEVVFVSKDVAKHLGFQSAVEALRGLYSRVKKGATLVCAWAEEGADALGPD 
         :                                                                                                                          
 5wbm(B) : LPDVSATDFEKVDLTQFKWIHIEGRNASEQVKMLQRIDAHNTRQPPEQKIRVSVEVEKPREELFQLFGYGDVVFVSKDVAKHLGFQSAEEALRGLYGRVRKGAVLVCAWAEEGADALGPD 
           ________________________________________________________________________________________________________________________ 

           ______________________________________________________________                                                           
 6p2d(A) : GQLLHSDAFPPPRVVDTLGAGDTFNASVIFSLSKGNSMQEALRFGCQVAGKKCGLQGFDGIV                                                           
         :                                                                                                                          
 5wbm(B) : GKLLHSDAFPPPRVVDTLGAGDTFNASVIFSLSQGRSVQEALRFGCQVAGKKCGLQGFDGIV                                                           
           ______________________________________________________________                                                           

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		22.8
Translation
(A) 		0.0
Closure
(%) 		64.3
Bending Residues
( green ) 		  13 - 14
  37 - 38
  93 - 95
  111 - 119
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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