Phosphoglucosamine Mutase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Phosphoglucosamine Mutase
  Conformer 1
(PDB) 		6gyz (A)
  Conformer 2
(PDB) 		3pdk (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 366 0.76   5 - 372
2 74 1.33   373 - 446

Sequence


           ________________________________________________________________________________________________________________________ 
 6gyz(A) : KYFGTDGVRGVANQELTPELAFKLGRYGGYVLAHNKGEPRVLVGRDTRVSGEMLESALIAGLISIGAEVMRLGIISTPGVAYLTRDMGAELGVMISASHNPVADNGIKFFGSDGFKLSDE 
         :                                                                                                                          
 3pdk(B) : KYFGTDGVRGVANKELTPELAFKIGRFGGYVLTKDTDRPKVIIGRDTRISGHMLEGALVAGLLSTGAEVMRLGVISTPGVAYLTKALDAQAGVMISASHNPVQDNGIKFFGSDGFKLTDE 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 6gyz(A) : QENEIEALLDQENPELPRPVGNDIVHYSDYFEGAQKYLSYLKSTVDVNFEGLKIALDGANGSTSSLAPFLFGDLEADTETIGCSPDGYNINEKCGSTHPEKLAEKVVETESDFGLAFDGD 
         :                                                                                                                          
 3pdk(B) : QEAEIEALLDKEVDELPRPTGTNLGQVSDYFEGGQKYLQYIKQTVEEDFSGLHIALDCAHGATSSLAPYLFADLEADISTMGTSPNGMNINDGVGSTHPEVLAELVKEKGADIGLAFDGD 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 6gyz(A) : GDRIIAVDENGQIVDGDQIMFIIGQEMHKNQELNNDMIVSTVMSNLGFYKALEQEGIKSNKTKVGDRYVVEEMRRGNYNLGGEQSGHIVMMDYNTTGDGLLTGIQLASVIKMTGKSLSEL 
         :                                                                                                                          
 3pdk(B) : GDRLIAVDEKGNIVDGDQIMFICAKYMKETGQLKHNTVVSTVMSNLGFYKALEANGITSDKTAVGDRYVMEEMKRGGYNLGGEQSGHIILLDYITTGDGMLSALQLVNIMKMTKKPLSEL 
           ________________________________________________________________________________________________________________________ 

           __369__________________________________________________________________________________                                  
 6gyz(A) : AGQMKKYPQSLINVRVTDKYRVEENVDVKEVMTKVEVEMNGEGRILVRPSGTEPLVRVMVEAATDEDAERFAQQIADVVQDKMGLDK                                  
         :                                                                                                                          
 3pdk(B) : AGEMTKFPQLLVNVRVTDKKLALENEKIKEIIRVVEEEMNGDGRILVRPSGTEPLIRVMAEAPTQEVCDAYVHRIVEVVKAEVG***                                  
           __367__________________________________________________________________________________                                  

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		44.8
Translation
(A) 		-1.9
Closure
(%) 		68.6
Bending Residues
( green ) 		  369 - 373
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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