Son Of Sevenless Protein Homolog 1

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Son Of Sevenless Protein Homolog 1
  Conformer 1
(PDB) 		1bkd (S)
  Conformer 2
(PDB) 		2ii0 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 255 0.86   759 - 938   968 - 1042
2 166 1.13   573 - 738   939 - 967

Sequence


           ________________________________________________________________________________________________________________________ 
 1bkd(S) : **RLPSADVYRFAEPDSEENIIFEEgIPIIKAGTVIKLIERLTYHMYADPNFVRTFLTTYRSFCKPQELLSLIIERFEIPEP----------------------rFRKEYIQPVQLRVLN 
         :                                                                                                                          
 2ii0(A) : QMRLPSADVYRFAEPDSEENIIFE-gIPIIKAGTVIKLIERLTYHMYADPNFVRTFLTTYRSFCKPQELLSLIIERFEIPEPEPTEADRIAIENGDQPLSAELKRFRKEYIQPVQLRVLN 
           ________________________________________________________________________________________________________________________ 

           ____________________________________________738_________________________________________________________________________ 
 1bkd(S) : VCRHWVEHHFYDFERDAYLLQRMEEFIGTVRGKAMKKWVESITKIIQRKKiTFQSSPPTVEWHISRPGHIETFDLLTLHPIEIARQLTLLESDLYRAVQPSELVGSVWTKEDKEINSPNL 
         :                                                                                                                          
 2ii0(A) : VCRHWVEHHFYDFERDAYLLQRMEEFIGTVRGKAMKKWVESITKIIQRKKIAfQSSPPTVEWHISRPGHIETFDLLTLHPIEIARQLTLLESDLYRAVQPSELVGSVWTKEDKEINSPNL 
           ____________________________________________738_________________________________________________________________________ 

           _________________________________________________________________________________________________________929____________ 
 1bkd(S) : LKMIRHTTNLTLWFEKCIVETENLEERVAVVSRIIEILQVFQELNNFNGVLEVVSAMNSSPVYRLDHTFEQIPSRQKKILEEAHELSEDHYKKYLAKLRSINPPCVPFFGIYLTNILKTE 
         :                                                                                                                          
 2ii0(A) : LKMIRHTTNLTLWFEKCIVETENLEERVAVVSRIIEILQVFQELNNFNGVLEVVSAMNSSPVYRLDHTFEQIPSRQKKILEEAHELSEDHYKKYLAKLRSINPPCVPFFGIYLTNILKTE 
           _________________________________________________________________________________________________________929____________ 

           _______________________967______________________________________________________________________________                 
 1bkd(S) : EGNPEVLKRHGKELINFSKRRKVAEITGEIQQYQNQPYCLRVESDIKRFFENLNPMGNSMEKEFTDYLFNKSLEIEPRNPKPLPRFPKKYSYPLKSPGVRPSN*                 
         :                                                                                                                          
 2ii0(A) : EGNPEVLKRHGKELINFSKRRKVAEITGEIQQYQNQPYCLRVESDIKRFFENLNPMGNSMEKEFTDYLFNKSLEIEPRNPKPLPRFPKKYSYPLKSPGVRPSNP                 
           _______________________967______________________________________________________________________________                 

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		13.9
Translation
(A) 		2.1
Closure
(%) 		59.2
Bending Residues
( green ) 		  738 - 759
  929 - 939
  967 - 968
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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