Udp-Glucose 4-Epimerase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Udp-Glucose 4-Epimerase
  Conformer 1
(PDB) 		3enk (A)
  Conformer 2
(PDB) 		1ek5 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 253 1.25   8 - 127   140 - 145   147 - 204   237 - 269   303 - 338
2 78 0.97   128 - 139   146 - 146   205 - 236   270 - 302

Sequence


           ________________________________________________________________________________________________________________________ 
 3enk(A) : MSTKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKR------EAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRV 
         :                                                                                                                          
 1ek5(A) : **MAEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEI 
           ________________________________________________________________________________________________________________________ 

           __________127____134________145_________________________________________________________204____________________________2 
 3enk(A) : MRERAVKRIVFSSSATVYGVPERSPIDETFPLSA-TNPYGQTKLMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGV 
         :                                                                                                                          
 1ek5(A) : MKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGV 
           __________131____138________149_________________________________________________________209____________________________2 

           35_______________________________269______________________________302_______________________________________             
 3enk(A) : RDYIHVVDLARGHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGRAVPYELVARRPGDVAECYANPAAAAETIGWKAERDLERMCADHWRWQENNPRGFV*             
         :                                                                                                                          
 1ek5(A) : RDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARREGDVAACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQNPSGFGT             
           40_______________________________274______________________________307_______________________________________             

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		11.1
Translation
(A) 		0.0
Closure
(%) 		89.7
Bending Residues
( green ) 		  127 - 128
  134 - 140
  145 - 148
  204 - 205
  235 - 237
  269 - 270
  302 - 303
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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