Non-Ribosomal Peptide Synthetase Modules

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Non-Ribosomal Peptide Synthetase Modules
  Conformer 1
(PDB) 		7c1k (A)
  Conformer 2
(PDB) 		7c1r (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 205 1.45   10 - 178   270 - 272   280 - 287   323 - 326   353 - 373
2 199 1.79   179 - 269   273 - 279   288 - 322   327 - 352   374 - 429

Sequence


           ________________________________________________________________________________________________________________________ 
 7c1k(A) : ********STTYALSAAQTEIWLAQQLYPDSPVYNIAQYTVIEGVIEPAVFEAALRQVIDEADTLRLQFIDSDDGLRQRIGTPAWSMPVLDLTAQADPQAAAQAWMRADYQQPVNLTQGP 
         :                                                                                                                          
 7c1r(A) : SHMDASVMSTTYALSAAQTEIWLAQQLYPDSPVYNIAQYTVIEGVIEPAVFEAALRQVIDEADTLRLQFIDSDDGLRQRIGTPAWSMPVLDLTAQADPQAAAQAWMRADYQQPVNLTQGP 
           ________________________________________________________________________________________________________________________ 

           _________________________________________________________178____________________________________________________________ 
 7c1k(A) : LFCYALLKVAPAQWMWYQRYHHIMMDGYGAYLIAQRVAYVYSALCEGTTPAECDFGSILQLLESDAQYQISAQRAQDEAYWLKHCANWSEPATLAS-------qRLRQTTYLAIQApDAR 
         :                                                                                                                          
 7c1r(A) : LFCYALLKVAPAQWMWYQRYHVIMMDGYGAYLIAQRVAYVYSALCEGTTPAECDFGSILQLLESDAQYQISAQRAQDEAYWLKHCANWSEPATLASRSAPVLQQRLRQTTYLAIQApDAR 
           _________________________________________________________178____________________________________________________________ 

           _______________________269_____________285__________________________________322_326__________________347________________ 
 7c1k(A) : RLAQFMTAAMAAYLYRFTGEQDVVLGLPVKVRFGADRHIPGMKSNTLPLRLTMRPGMNLSSLMQQAAQEMQSGLRHQRYPSEALRRQLG----qRLFGTTVNVMPFDLDLSFGGYSATNH 
         :                                                                                                                          
 7c1r(A) : RLAQFMTAAMAAYLYRFTGEQDVVLGLPVKVRFGADRHIPGMKSNTLPLRLTMRPGMNLSSLMQQAAQEMQSGLRHQRYPSEALRRQLGMPSGQRLFGTTVNVMPFDLDLSFGGYSATNH 
           _______________________269_____________285__________________________________322_326__________________347________________ 

           _______373__________________________________________________________                                                     
 7c1k(A) : NLLNGPAEDLMLGVYWTPGSHQLRIDFDANPACYTPEGLGAHQRRFIRFMQVLAADATQPIDSIDLLD                                                     
         :                                                                                                                          
 7c1r(A) : NLLNGPAEDLMLGVYWTPGSHQLRIDFDANPACYTPEGLGAHQRRFIRFMQVLAADATQPIDSIDLLD                                                     
           _______373__________________________________________________________                                                     

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		12.0
Translation
(A) 		1.1
Closure
(%) 		89.3
Bending Residues
( green ) 		  178 - 179
  269 - 270
  272 - 282
  285 - 288
  322 - 323
  326 - 327
  347 - 353
  373 - 374
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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