Phosphoserine Phosphatase (Psp)

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Phosphoserine Phosphatase (Psp)
  Conformer 1
(PDB) 		1f5s (A)
  Conformer 2
(PDB) 		1l7o (B)
  Window Length 11
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 176 0.74   9 - 30   52 - 206
2 20 0.84   31 - 51

Sequence


           _________________________28_____________________51______________________________________________________________________ 
 1f5s(A) : EKKKKLILFDFDSTLVNNETIDEIAREAGVEEEVKKITKEAMEGKLNFEQSLRKRVSLLKDLPIEKVEKAIKRITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFAN 
         :                                                                                                                          
 1l7o(B) : **KKKLILFNFDSTLVNNETIDEIAREAGVEEEVKKITKEA-eGKLNFEQSLRKRVSLLKDLPIEKVEKAIKRITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFAN 
           ________________________528____________________551______________________________________________________________________ 

           __________________________________________________________________________________________                               
 1f5s(A) : RLIVKDGKLTGDVEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFCAKPILKEKADICIEKRDLREILKYIK                               
         :                                                                                                                          
 1l7o(B) : RLIVKDGKLTGDVEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDGANDIS-fKKAGLKIAFCAKPILKEKADICIEKRDLREILKYIK                               
           __________________________________________________________________________________________                               

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		25.9
Translation
(A) 		-0.2
Closure
(%) 		95.7
Bending Residues
( green ) 		  28 - 31
  51 - 52
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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