Plasmid Segregation Protein Parm

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Plasmid Segregation Protein Parm
  Conformer 1
(PDB) 		4a61 (A)
  Conformer 2
(PDB) 		4a62 (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 169 0.86   3 - 108   113 - 152   278 - 278   286 - 290   293 - 293   303 - 318
2 135 1.39   109 - 112   153 - 277   279 - 285   291 - 292   294 - 302

Sequence


           __________________________________________________________________________________________________________108_112_______ 
 4a61(A) : HHLVFIDDGSTNIKLQWQESDGTIKQHISPNSFKREWAVSFGDKKVFNYTLNGEQYSFDPISPDAVVTTNIAWQYSDVNVVAVHHALLTSGLPVSEVDIVCTLPLTEYYDRNNQPNTENI 
         :                                                                                                                          
 4a62(B) : *MLVFIDDGSTNIKLQWQESDGTIKQHISPNSFKREWAVSFGDKKVFNYTLNGEQYSFDPISPDAVVTTNIAWQYSDVNVVAVHHALLTSGLPVSEVDIVCTLPLTEYYDRNNQPNTENI 
           __________________________________________________________________________________________________________108_112_______ 

           ______________________________152_______________________________________________________________________________________ 
 4a61(A) : ERKKANFRKKITLNGGDTFTIKDVKVMPESIPAGYEVLQELDERDSLLIIDLGGTTLDISQVMGKLSGISKIYGDSSLGVSLVTSAVKDALs-------SYLADDIIIHRKDNNYLKQRI 
         :                                                                                                                          
 4a62(B) : ERKKANFRKKITLNGGDTFTIKDVKVMPESIPAGYEVLQELDEADSLLIIDLGGTTLDISQVMGKLSGISKIYGDSSLGVSLVTSAVKDALSLARTKGSSYLADDIIIHRKDNNYLKQRI 
           ______________________________152_______________________________________________________________________________________ 

           ___________________________________277_____285__290_________302__________________                                        
 4a61(A) : N-----sIVTEAMNEALRKLEQRVLNTLNEFSGYTHVMVIGGGAELICDAVKKHTQIRDERFFKTNNSQYDLVNGMYLIGN                                        
         :                                                                                                                          
 4a62(B) : NDENKISIVTEAMNEALRKLEQRVLNTLNEFSGYTHVMVIGGGAELICDAVKKHTQIRDERFFKTNNSQYDLVNGMYLIGN                                        
           ___________________________________277_____285__290_________302__________________                                        

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		11.7
Translation
(A) 		-0.5
Closure
(%) 		35.3
Bending Residues
( green ) 		  108 - 109
  112 - 113
  152 - 153
  277 - 279
  285 - 286
  290 - 294
  302 - 303
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Mixed

PyMOL Script

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