Putative Iron Compound-Binding Protein Of Abc Transporter Family

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Putative Iron Compound-Binding Protein Of Abc Transporter Family
  Conformer 1
(PDB) 		3be5 (B)
  Conformer 2
(PDB) 		3be6 (B)
  Window Length 11
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 152 0.4   64 - 76   94 - 100   103 - 103   119 - 120   172 - 305
2 123 0.24   26 - 63   77 - 93   101 - 102   104 - 118   121 - 171

Sequence


           ___________________________________________63___________76_______________93____99________________118____________________ 
 3be5(B) : EPVQVFTDDLGRKVTVPAHPKRIVSLHDLDITIPLIELGVPPVASHGRTRPDGSHFIRSGALLTGVDFDNSSIAFIGTADIDIEAIVAAKPDLIITEPTRNTPIERLEKIAPTVSIDHLK 
         :                                                                                                                          
 3be6(B) : **VQVFTDDLGRKVTVPAHPKRIVSLHDLDITIPLIELGVPPVASHGRTRPDGSHFIRSGALLTGVDFDNSSIAFIGTADIDIEAIVAAKPDLIITEPTRNTPIERLEKIAPTVSIDHLK 
           ___________________________________________63___________76_______________93____99________________118____________________ 

           ______________________________171_______________________________________________________________________________________ 
 3be5(B) : GGAPEIYRKLAELTGTQSQLAILERRYQAQINALKATLDSQKITVSVIQANQGKINVhSYHSLGRVLRDAGFRFPPLIESIPEGGRdVSAERLPELDADFVFATWRGDTGGKPQDELATe 
         :                                                                                                                          
 3be6(B) : GGAPEIYRKLAELTGTQSQLAILERRYQAQINALKATLDSQKITVSVIQANQGKINVhSYHSLGRVLRDAGFRFPPLIESIPEGGRdVSAERLPELDADFVFATWRGDTGGKPQDELATe 
           ______________________________171_______________________________________________________________________________________ 

           _________________________________________________                                                                        
 3be5(B) : KVpGWCQFLTACRSGRYVLISREEAISNSFASLGLaAQIQSQIAGRPLP                                                                        
         :                                                                                                                          
 3be6(B) : KVpGWCQFLTACRSGRYVLISREEAISNSFASLGLaAQIQSQIAGRPLP                                                                        
           _________________________________________________                                                                        

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
For more advanced options, right click on the model.


Show console


play backwards pause play forwards

Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		3.7
Translation
(A) 		-0.3
Closure
(%) 		74.6
Bending Residues
( green ) 		  63 - 64
  76 - 77
  93 - 94
  99 - 104
  118 - 121
  171 - 172
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Mixed

PyMOL Script

Download and extract PyMOL PML script file Download