Putative Acetylglutamate Synthase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Putative Acetylglutamate Synthase
  Conformer 1
(PDB) 		3d2m (A)
  Conformer 2
(PDB) 		3d2p (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 269 0.9   7 - 283
2 143 1.65   284 - 434

Sequence


           ________________________________________________________________________________________________________________________ 
 3d2m(A) : DSFVAHFREAAPYIRQMRGTTLVAGIDGRLLEGGTLNKLAADIGLLSQLGIRLVLIHGAYHFLDRLAAAQGRTPHYCRGLRVTDETSLGQAQQFAGTVRSRFEAALCGS--------sVP 
         :                                                                                                                          
 3d2p(A) : DSFVAHFREAAPYIRQMRGTTLVAGIDGRLLEGGTLNKLAADIGLLSQLGIRLVLIHGAYHFLDRLAAAQGRTPHYCRGLRVTDETSLGQAQQFAGTVRSRFEAALCGSVSGFARAPSVP 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 3d2m(A) : LVSGNFLTARPIGVIDGTDMEYAGVIRKTDTAALRFQLDAGNIVWMPPLGHSYGGKTFNLDMVQAAASVAVSLQAEKLVYLTLSDGISRPDGTLAETLSAQEAQSLAEHAASETRRLISS 
         :                                                                                                                          
 3d2p(A) : LVSGNFLTARPIGVIDGTDMEYAGVIRKTDTAALRFQLDAGNIVWMPPLGHSYGGKTFNLDMVQAAASVAVSLQAEKLVYLTLSDGISRPDGTLAETLSAQEAQSLAEHAASETRRLISS 
           ________________________________________________________________________________________________________________________ 

           ____________________________________283_________________________________________________________________________________ 
 3d2m(A) : AVAALEGGVHRVQILNGAADGSLLQELFTRNGIGTSIAKEAFVSIRQAHSGDIPHIAALIRPLEEQGILLHRSREYLENHISEFSILEHDGNLYGCAALKTFAEADCGEIACLAVSPQAQ 
         :                                                                                                                          
 3d2p(A) : AVAALEGGVHRVQILNGAADGSLLQELFTRNGIGTSIAKEAFVSIRQAHSGDIPHIAALIRPL----iLLHRSREYLENHISEFSILEHDGNLYGCAALKTFAEADCGEIACLAVSPQAQ 
           ____________________________________283_________________________________________________________________________________ 

           ________________________________________________________________________                                                 
 3d2m(A) : DGGYGERLLAHIIDKARGIGISRLFALSTNTGEWFAERGFQTASEDELPETRRKDYRSNGRNSHILVRRLHR                                                 
         :                                                                                                                          
 3d2p(A) : DGGYGERLLAHIIDKARGIGISRLFALSTNTGEWFAERGFQTASEDELPETRRKDYR----nSHILVRRLHR                                                 
           ________________________________________________________________________                                                 

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		111.7
Translation
(A) 		3.9
Closure
(%) 		26.4
Bending Residues
( green ) 		  283 - 287
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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