Transcriptional Regulator Mntr

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Transcriptional Regulator Mntr
  Conformer 1
(PDB) 		2hyf (B)
  Conformer 2
(PDB) 		2f5d (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 87 0.62   7 - 11   18 - 22   24 - 33   66 - 132
2 32 0.48   12 - 17   23 - 23   34 - 65

Sequence


           ________11____17___22_________33__________________________65____________________________________________________________ 
 2hyf(B) : *TPS-eDYIEQIY-lIEEKGYARVSDIAEALAVHPSSVTK-vQKLDKDEYLI-gLVLTSKGKKIGKRLVYRHELLEQFLRIIGVDEEKIYNDVEGIEHHLSWNSIDRIGDLVQYFEEDDA 
         :                                                                                                                          
 2f5d(B) : TTPSMEDYIEQIYMLIEEKGYARVSDIAEALAVHPSSVTKMVQKLDKDEYLIYgLVLTSKGKKIGKRLVYRHELLEQFLRIIGVDEEKIYNDVEGIEHHLSWNSIDRIGDLVQYFEEDDA 
           ________11____17___22_________33__________________________65____________________________________________________________ 

           ___________                                                                                                              
 2hyf(B) : RKKDLKSIQ**                                                                                                              
         :                                                                                                                          
 2f5d(B) : RKKDLKSIQKK                                                                                                              
           ___________                                                                                                              

Morph
Morph animation in progress.
Status: Initialising

This morph was created using the MorphIt_Pro protein morphing technique.
For more advanced options, right click on the model.


Show console


play backwards pause play forwards

Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		8.3
Translation
(A) 		-0.1
Closure
(%) 		90.3
Bending Residues
( green ) 		  11 - 12
  17 - 18
  22 - 24
  33 - 35
  65 - 66
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

Download and extract PyMOL PML script file Download