Trp Operon Repressor

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Trp Operon Repressor
  Conformer 1
(PDB) 		1wrp (R)
  Conformer 2
(PDB) 		3wrp  
  Window Length 13
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 66 0.58   14 - 61   82 - 99
2 20 1.09   62 - 81

Sequence


           ________________________________________________________61__________________81___________________________                
 1wrp(R) : QSPYSAAMAEQRHQEWLRFVDLLKNAYQNDLHLPLLNLMLTPDEREALGTRVRIVEELLRGEMSQRELKNELGAGIATITRGSNSLKAAPVELRQWLEEVLL***                
         :                                                                                                                          
 3wrp    : ****SAAMAEQRHQEWLRFVDLLKNAYQNDLHLPLLNLMLTPDEREALGTRVRIVEELLRGEMSQRELKNELGAGIATITRGSNSLKAAPVELRQWLEEVLLKSD                
           ________________________________________________________61__________________81___________________________                

Morph
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Status: Initialising

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		16.3
Translation
(A) 		0.1
Closure
(%) 		74.3
Bending Residues
( green ) 		  61 - 62
  81 - 82
Bending Region Analysis

Dynamic Contact Graph

The dynamic contact graph is still being generated. Progress: Initialising

PyMOL Script

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