Zinc-Alpha-2-Glycoprotein

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Zinc-Alpha-2-Glycoprotein
  Conformer 1
(PDB) 		2icn (A)
  Conformer 2
(PDB) 		1t7x (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 172 0.62   7 - 34   36 - 175   179 - 181   238 - 238
2 97 0.62   35 - 35   176 - 178   182 - 237   239 - 275

Sequence


           _______________________________34_______________________________________________________________________________________ 
 2icn(A) : ENQDGRYSLTYIYTGLSKHVEDVPAFQALGSLNDLQFFRYNSKDRKSQPMGLWRQVEGMEDWKQDSQLQKAREDIFMETLKDIVEYYNDSNGSHVLQGRFGCEIENNRSSGAFWKYYYDG 
         :                                                                                                                          
 1t7x(A) : ***DGRYSLTYIYTGLSKHVEDVPAFQALGSLNDLQFFRYNSKDRKSQPMGLWRQVEGMEDWKQDSQLQKAREDIFMETLKDIVEYYKDSTGSHVLQGRFGCEIENNRSSGAFWKYYYDG 
           _______________________________34_______________________________________________________________________________________ 

           ___________________________________________________175___________________________________________________________237____ 
 2icn(A) : KDYIEFNKEIPAWVPFDPAAQITKQKWEAEPVYVQRAKAYLEEECPATLRKYLKYSKNILDRQDPPSVVVTSHQAPGEKKKLKCLAYDFYPGKIDVHWTRAGEVQEPELRGDVLHNGNGT 
         :                                                                                                                          
 1t7x(A) : KDYIEFNKEIPAWVPFDPAAQITKQKWEAEPVYVQRAKAYLEEECPATLRKYLKYSKNILDRQDPPSVVVTSHQAPGEKKKLKCLAYDFYPGKIDVHWTRAGEVQEPELRGDVLHNGNGT 
           ___________________________________________________175___________________________________________________________237____ 

           ____________________________________                                                                                     
 2icn(A) : YQSWVVVAVPPQDTAPYSCHVQHSSLAQPLVVPWEA                                                                                     
         :                                                                                                                          
 1t7x(A) : YQSWVVVAVPPQDTAPYSCHVQHSSLAQPLVVPWEA                                                                                     
           ____________________________________                                                                                     

Morph
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Status: Initialising

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		14.5
Translation
(A) 		-0.5
Closure
(%) 		94.2
Bending Residues
( green ) 		  34 - 36
  175 - 182
  237 - 239
Bending Region Analysis

Dynamic Contact Graph

The dynamic contact graph is still being generated. Progress: Initialising

PyMOL Script

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