Fructose Transport System Repressor Frur

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Fructose Transport System Repressor Frur
  Conformer 1
(PDB) 		3o74 (A)
  Conformer 2
(PDB) 		3o75 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 135 0.33   160 - 288   321 - 327
2 129 0.35   62 - 159   290 - 320

Sequence


           _________________________________________________________________________________________________159____________________ 
 3o74(A) : HTRTLGFILPDLENPSYARIAKQLEQGARARGYQLLIASSDDQPDSERQLQQLFRARRCDALFVASCLPPEDDSYRELQDKGLPVIAIDRRLDPAHFCSVISDDRDASRQLAASLLSSAP 
         :                                                                                                                          
 3o75(A) : HTRTLGFILPDLENPSYARIAKQLEQGARARGYQLLIASSDDQPDSERQLQQLFRARRCDALFVASCLPPEDDSYRELQDKGLPVIAIDRRLDPAHFCSVISDDRDASRQLAASLLSSAP 
           _________________________________________________________________________________________________159____________________ 

           __________________________________________________________________________________________________________288___________ 
 3o74(A) : RSIALIGARPELSVSQARAGGFDEALQGYTGEVRRYQGEAFSRECGQRL-qQLIDDLGGLPDALVTTSYVLLQGVFDTLQARPVDSRQLQLGTFGDNQLLDFLPLPVNA-aQQHGQIAAT 
         :                                                                                                                          
 3o75(A) : RSIALIGARPELSVSQARAGGFDEALQGYTGEVRRYQGEAFSRECGQRLMQQLIDDLGGLPDALVTTSYVLLQGVFDTLQARPVDSRQLQLGTFGDNQLLDFLPLPVNAMAQQHGQIAAT 
           __________________________________________________________________________________________________________288___________ 

           _________________319__________                                                                                           
 3o74(A) : ALELALAAIEEKRYEPGVHAVGRTFKQRIS                                                                                           
         :                                                                                                                          
 3o75(A) : ALELALAAIEEKRYEPGVHAVGRTFKQRIS                                                                                           
           _________________319__________                                                                                           

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		3.9
Translation
(A) 		-0.3
Closure
(%) 		1.1
Bending Residues
( green ) 		  159 - 164
  288 - 290
  319 - 321
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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