Ig Epsilon Chain C Region

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Ig Epsilon Chain C Region
  Conformer 1
(PDB) 		1o0v (B)
  Conformer 2
(PDB) 		4ezm (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 108 1.12   337 - 436   443 - 443   473 - 473   524 - 529
2 99 0.95   437 - 442   444 - 472   474 - 523   530 - 543

Sequence


           ________________________________________________________________________________________________________________________ 
 1o0v(B) : DFTPPTVKILQSSCDGGGHFPPTIQLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDRTYTCQVTYQGHTFEDSTKKCADSNPRGVSAYLSRPSPF 
         :                                                                                                                          
 4ezm(A) : ************************************************************************************************************GVSAYLSRPSPF 
           ________________________________________________________________________________________________________________________ 

           _______________________________________________________________________________________436___442________________________ 
 1o0v(B) : DLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLPRALMRSTTKTSGPRAAPEVYAFATPEWPGSRDKRTLACLI 
         :                                                                                                                          
 4ezm(A) : DLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVQHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLPRALMRSTTKTSGPRAAPEVYAFATPEWPGSRDKRTLACLI 
           _______________________________________________________________________________________436___442________________________ 

           ___472________________________________________________523___529_________________                                         
 1o0v(B) : QNFMPEDISVQWLHNEVQLPDARHSTTQPRKTKGSGFFVFSRLEVTRAEWEQKDEFICRAVHEAASPSQTVQRAVSVNPG                                         
         :                                                                                                                          
 4ezm(A) : QNFMPEDISVQWLHNEVQLPDARHSTTQPRKTKGSGFFVFSRLEVTRAEWEQKDEFICRAVHEAASPSQTVQRAVSVNP*                                         
           ___472________________________________________________523___529_________________                                         

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
For more advanced options, right click on the model.


Show console


play backwards pause play forwards

Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		12.6
Translation
(A) 		0.5
Closure
(%) 		69.3
Bending Residues
( green ) 		  436 - 438
  442 - 444
  472 - 474
  523 - 524
  529 - 530
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

Download and extract PyMOL PML script file Download