Inorganic Pyrophosphatase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Inorganic Pyrophosphatase
  Conformer 1
(PDB) 		1i40 (A)
  Conformer 2
(PDB) 		1i6t (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 151 0.41   3 - 10   12 - 58   71 - 166
2 20 0.36   11 - 11   59 - 70   167 - 173

Sequence


           ________10______________________________________________58__________70__________________________________________________ 
 1i40(A) : SLLNVPAGKDLPEDIYVVIEIPANADPIKYEIDKESGALFVDRFMSTAMFYPCNYGYINHTLSLDGDPVDVLVPTPYPLQPGSVTRCRPVGVLKMTDEAGEDAKLVAVPHSKLSKEYDHI 
         :                                                                                                                          
 1i6t(A) : SLLNVPAGKDLPEDIYVVIEIPANADPIKYEIDKESGALFVDRFMSTAMFYPCNYGYINHTLSLDGDPVDVLVPTPYPLQPGSVTRCRPVGVLKMTDEAGEDAKLVAVPHSKLSKEYDHI 
           ________10______________________________________________58__________70__________________________________________________ 

           _________________________________________164___________                                                                  
 1i40(A) : KDVNDLPELLKAQIAHFFEHYKDLEKGKWVKVEGWENAEAAKAEIVASFERAKNK                                                                  
         :                                                                                                                          
 1i6t(A) : KDVNDLPELLKAQIAHFFEHYKDLEKGKWVKVEGWENAEAAKAEIVASFERAKNK                                                                  
           _________________________________________164___________                                                                  

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		5.1
Translation
(A) 		0.1
Closure
(%) 		59.0
Bending Residues
( green ) 		  10 - 12
  58 - 59
  70 - 71
  164 - 167
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Mixed

PyMOL Script

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