Protein Reca

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Protein Reca
  Conformer 1
(PDB) 		2oe2 (A)
  Conformer 2
(PDB) 		1xp8 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 236 2.23   7 - 270
2 58 1.09   271 - 328

Sequence


           ________________________________________________________________________________________________________________________ 
 2oe2(A) : APDREKALELAMAQIDKNFGKGSVMRLGEEVRQPISVIPTGSISLDVALGIGGLPRGRVIEIYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYAKKLGVDTDSLLVSQPDTG 
         :                                                                                                                          
 1xp8(A) : AKERSKAIETAMSQIEKAFGKGSIMKLGAESKLDVQVVSTGSLSLDLALGVGGIPRGRITEIYGPESGGKTTLALAIVAQAQKAGGTCAFIDAEHALDPVYARALGVNTDELLVSQPDNG 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 2oe2(A) : EQALEIADMLVRSGALDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGALNNSGTTAIFINQLREKIGVMFGSPETTTGGKALKFYASVRLDVRRIETLKDGTDAVGNRT 
         :                                                                                                                          
 1xp8(A) : EQALEIMELLVRSGAIDVVVVDSVAALTPRAEIpG--------LQARLMSQALRKLTAILSKTGTAAIFINQV---------------gGRALKFYASVRLDVRKI-----GQPTvANTV 
           ________________________________________________________________________________________________________________________ 

           _______________________270____________________________________________________________                                   
 2oe2(A) : RVKVVKNKVSPPFKQAEFDILYGQGISREGSLIDMGVEHGFIRKSGSWFTYEGEQLGQGKENARKFLLENTDVANEIEKKIKEKLG                                   
         :                                                                                                                          
 1xp8(A) : KIKTVKNKVAAPFKEVELALVYGKGFDQLSDLVGLAADMDIIKKAGSFYSYGDERIGQGKEKTIAYIAERPEMEQEIRDRVMAAIR                                   
           _______________________281____________________________________________________________                                   

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		33.0
Translation
(A) 		0.6
Closure
(%) 		90.3
Bending Residues
( green ) 		  270 - 271
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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