Zinc-Alpha-2-Glycoprotein

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Zinc-Alpha-2-Glycoprotein
  Conformer 1
(PDB) 		2icn (A)
  Conformer 2
(PDB) 		2bck (A)
  Window Length 7
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 168 2.87   10 - 179
2 94 2.47   180 - 274

Sequence


           ________________________________________________________________________________________________________________________ 
 2icn(A) : ENQDGRYSLTYIYTGLSKHVEDVPAFQALGSLNDLQFFRYNSKDRKSQ---PMGLWRQVEGMEDWKQDSQLQKAREDIFMETLKDIVEYYNDSN-GSHVLQGRFGCEI-ENNRSSGAFWK 
         :                                                                                                                          
 2bck(A) : ****GSHSMRYFSTSVSRPGRGEPRFIAVGYVDDTQFVRFDS-DAASQRMEPRAPWIEQEGPEYWDEETGKVKAHSQTDRENLRIALRYYNQSEAGSHTLQMMFGCDVGSDGRFLRGYHQ 
           ________________________________________________________________________________________________________________________ 

           ____________________________________________________________179_________________________________________________________ 
 2icn(A) : YYYDGKDYIEFNKEIPAWVPFDPAAQITKQKWEAEPVYVQRAKAYLEEECPATLRKYLKYSKNILDRQDPPSVVVTSHQAPGEKKKLKCLAYDFYPGKIDVHWTRAGE--VQEPELRGDV 
         :                                                                                                                          
 2bck(A) : YAYDGKDYIALKEDLRSWTAADMAAQITKRKWEAAHVAEQQ-RAYLEGTCVDGLRRYLENGKETLQRTDPPKTHMTHHPISDHEATLRCWALGFYPAEITLTWQRDGEDQTQDTELV-ET 
           ____________________________________________________________177_________________________________________________________ 

           _____________________________________________________                                                                    
 2icn(A) : LHNGNGTYQSWVVVAVPPQDTAPYSCHVQHSSLAQPLVVPWEA**********                                                                    
         :                                                                                                                          
 2bck(A) : RPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEPGSGGGLNDIF                                                                    
           _____________________________________________________                                                                    

Morph
Morph animation in progress.
Status: Initialising

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		26.2
Translation
(A) 		-2.6
Closure
(%) 		96.0
Bending Residues
( green ) 		  179 - 180
Bending Region Analysis

Dynamic Contact Graph

The dynamic contact graph is still being generated. Progress: Initialising

PyMOL Script

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