Ketohexokinase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Ketohexokinase
  Conformer 1
(PDB) 		6p2d (A)
  Conformer 2
(PDB) 		3b3l (C)
  Window Length 7
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 260 0.68   6 - 18   35 - 101   116 - 295
2 26 1.06   19 - 34   102 - 111

Sequence


           ____________16_______________33_________________________________________________________________101_______111___________ 
 6p2d(A) : EKQILCVGLVVLDIINVVDKYPEEDTDRRCLSQRWQRGGNASNSCTVLSLLGARCAFMGSLAPGHVADFLVADFRQRGVDVSQVTWQSQGDTPCSCCIVNNSNGSRTIILYDTNLPDVSA 
         :                                                                                                                          
 3b3l(C) : EKQILCVGLVVLDVISLVDKYPKEDSEIRCLSQRWQRGGNASNSCTVLSLLGAPCAFMGSMAPGHVADFLVADFRRRGVDVSQVAWQSKGDTPSSCCIINNSNGNRTIVLHDTSLPDVSA 
           ____________16_______________33_________________________________________________________________101_______111___________ 

           ________________________________________________________________________________________________________________________ 
 6p2d(A) : KDFEKVDLTRFKWIHIEGRNASEQVKMLQRIEEHNAKQPLPQKVRVSVEIEKPREELFQLFSYGEVVFVSKDVAKHLGFQSAVEALRGLYSRVKKGATLVCAWAEEGADALGPDGQLLHS 
         :                                                                                                                          
 3b3l(C) : TDFEKVDLTQFKWIHIEGRNASEQVKMLQRIDAHNTRQPPEQKIRVSVEVEKPREELFQLFGYGDVVFVSKDVAKHLGFQSAEEALRGLYGRVRKGAVLVCAWAEEGADALGPDGKLLHS 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________                                                                 
 6p2d(A) : DAFPPPRVVDTLGAGDTFNASVIFSLSKGNSMQEALRFGCQVAGKKCGLQGFDGIV                                                                 
         :                                                                                                                          
 3b3l(C) : DAFPPPRVVDTLGAGDTFNASVIFSLSQGRSVQEALRFGCQVAGKKCGLQGFDGIV                                                                 
           ________________________________________________________                                                                 

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		12.7
Translation
(A) 		-0.9
Closure
(%) 		98.1
Bending Residues
( green ) 		  16 - 19
  33 - 37
  101 - 102
  111 - 120
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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