Lipase Chaperone

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Lipase Chaperone
  Conformer 1
(PDB) 		2es4 (D)
  Conformer 2
(PDB) 		2es4 (E)
  Window Length 15
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 203 0.94   60 - 273
2 50 0.46   274 - 323

Sequence


           ________________________________________________________________________________________________________________________ 
 2es4(D) : MPLPAALPGALAGSHAPRLPLAAGGRLARTRAVREFFDYlTAQGELTPAALDALVRREIAAQLDGSPAQAEALGVWRRYRAYFDALA-------vLGDKLDPAAMQLALDQRAALADRTL 
         :                                                                                                                          
 2es4(E) : MPLPAALPGALAGSHAPRLPLAAGGRLARTRAVREFFDYlTAQGELTPAALDALVRREIAAQLDGSPAQAEALGVWRRYRAYFDALAQLPGDGAVLGDKLDPAAMQLALDQRAALADRTL 
           ________________________________________________________________________________________________________________________ 

           _________________________________________________________________________________________________273____________________ 
 2es4(D) : GEWAEPFFGDEQRRQRHDLERIRIANDt-LS--qKAARLAALDAQLTPDERAQQAALHAQQDAVTKIADLQKAGATPDQMRAQIAQTLGPEAAARAAQMQQDDEAWQTRYQAYAAERDRI 
         :                                                                                                                          
 2es4(E) : GEWAEPFFGDEQRRQRHDLERIRIANDTTLSPEQKAARLAALDAQLTPDERAQQAALHAQQDAVTKIADLQKAGATPDQMRAQIAQTLGPEAAARAAQMQQDDEAWQTRYQAYAAERDRI 
           _________________________________________________________________________________________________273____________________ 

           _______________________________________                                                                                  
 2es4(D) : AAQGLAPQDRDARIAQLRQQTFTAPGEAIRAASLDRGAG                                                                                  
         :                                                                                                                          
 2es4(E) : AAQGLAPQDRDARIAQLRQQTFTAPGEAIRAASLDRG**                                                                                  
           _______________________________________                                                                                  

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		10.0
Translation
(A) 		-0.6
Closure
(%) 		92.6
Bending Residues
( green ) 		  273 - 275
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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