Protein Hi0146

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Protein Hi0146
  Conformer 1
(PDB)
2cey (A)
  Conformer 2
(PDB)
2cex (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 171 0.31   4 - 81   87 - 126   211 - 254   294 - 294   296 - 303
2 129 0.27   82 - 86   127 - 210   255 - 293   295 - 295

Sequence


           _______________________________________________________________________________81___86__________________________________ 
 2cey(A) : ADYDLKFGMNAGTSSNEYKAAEMFAKEVKEKSQGKIEISLYPSSQLGDDRAMLKQLKDGSLDFTFAESARFQLFYPEAAVFALPYVISNYNVAQKALFDTEFGKDLIKKMDKDLGVTLLS 
         :                                                                                                                          
 2cex(A) : *DYDLKFGMNAGTSSNEYKAAEMFAKEVKEKSQGKIEISLYPSSQLGDDRAMLKQLKDGSLDFTFAESARFQLFYPEAAVFALPYVISNYNVAQKALFDTEFGKDLIKKMDKDLGVTLLS 
           _______________________________________________________________________________81___86__________________________________ 

           ___126_________________________________________________________________________________210______________________________ 
 2cey(A) : QAYNGTRQTTSNRAINSIADMKGLKLRVPNAATNLAYAKYVGASPTPMAFSEVYLALQTNAVDGQENPLAAVQAQKFYEVQKFLAMTNHILNDQLYLVSNETYKELPEDLQKVVKDAAEN 
         :                                                                                                                          
 2cex(A) : QAYNGTRQTTSNRAINSIADMKGLKLRVPNAATNLAYAKYVGASPTPMAFSEVYLALQTNAVDGQENPLAAVQAQKFYEVQKFLAMTNHILNDQLYLVSNETYKELPEDLQKVVKDAAEN 
           ___126_________________________________________________________________________________210______________________________ 

           __________253____________________________________292______________                                                       
 2cey(A) : AAKYHTKLFVDGEKDLVTFFEKQGVKITHPDLVPFKESMKPYYAEFVKQTGQKGESALKQIEAINP                                                       
         :                                                                                                                          
 2cex(A) : AAKYHTKLFVDGEKDLVTFFEKQGVKITHPDLVPFKESMKPYYAEFVKQTGQKGESALKQIEAIN*                                                       
           __________253____________________________________292______________                                                       

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
4.3
Translation
(A)
-0.1
Closure
(%)
85.7
Bending Residues
( green )
  81 - 82
  86 - 87
  126 - 127
  210 - 211
  253 - 255
  292 - 298
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Mixed

PyMOL Script

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