Putative Sugar Binding Protein

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Putative Sugar Binding Protein
  Conformer 1
(PDB) 		6gq0 (A)
  Conformer 2
(PDB) 		6gt9 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 144 0.89   152 - 286   316 - 324
2 131 0.49   50 - 151   287 - 315

Sequence


           _________________________________________________________________________________________________________151____________ 
 6gq0(A) : ***KEAYHFVLVPEELDNDYWRLVEKGAKAAAKELGVDLEYIGPRQANIDEHLRILKKAAAAKVDGIITQGLTEAEFVPVINEITDKNIPVVTIDTDAPTSRRVAYVGTDNYYAGFLAGR 
         :                                                                                                                          
 6gt9(A) : ETTKEAYHFVLVPEELDNDYWRLVEKGAKAAAKELGVDLEYIGPRQANIDEHLRILKKAAAAKVDGIITQGLTEAEFVPVINEITDKNIPVVTIDTDAPTSRRVAYVGTDNYYAGFLAGR 
           _________________________________________________________________________________________________________151____________ 

           ________________________________________________________________________________________________________________________ 
 6gq0(A) : ALAEDTKGKATVAIITGSLTAAHQQLRVRGFEDAVRQEKGIRIVAIEESHITRVQAAEKAYTILKKHPDVNAFYGTSALDAIGVAKVVEQFHREQKTYIIGFDTLPETIRYLQKGTIAAT 
         :                                                                                                                          
 6gt9(A) : ALAEDTKGKATVAIITGSLTAAHQQLRVRGFEDAVRQEKGIRIVAIEESHITRVQAAEKAYTILKKHPDVNAFYGTSALDAIGVAKVVEQFHREQKTYIIGFDTLPETIRYLQKGTIAAT 
           ________________________________________________________________________________________________________________________ 

           286__________________________315___________                                                                              
 6gq0(A) : VVQEPYEMGYKAVKMMAEIVAGKDVPVVTNTETKVIRKKDLPL                                                                              
         :                                                                                                                          
 6gt9(A) : VVQEPYEMGYKAVKMMAEIVAGKDVPVVTNTETKVIRKKDLPL                                                                              
           286__________________________315___________                                                                              

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		12.4
Translation
(A) 		-0.4
Closure
(%) 		28.3
Bending Residues
( green ) 		  151 - 152
  286 - 287
  315 - 316
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Mixed

PyMOL Script

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