S-Arrestin

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name S-Arrestin
  Conformer 1
(PDB) 		4zrg (A)
  Conformer 2
(PDB) 		4j2q (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 177 2.22   176 - 295   299 - 310   313 - 322   324 - 358
2 157 2.14   13 - 175   296 - 298   311 - 312   323 - 323

Sequence


           ________________________________________________________________________________________________________________________ 
 4zrg(A) : *VIFKKISRDKSVTIYLGKRDYIDHVERVEPVDGVVLVDPELVKGKRVYVSLTCAFRYG-------gLSFRRDLYFSQVQVFPPVGASGATTRLQESLIKKLGANTYPFLLTFPDYLPCS 
         :                                                                                                                          
 4j2q(B) : HVIFKKISRDKSVTIYLGKRDYIDHVERVEPVDGVVLVDPELVKGKRVYVSLTCAFRYGQEDIDVMGLSFRRDLYFSQVQVFPPVGASGATTRLQESLIKKLGANTYPFLLTFPDYLPCS 
           ________________________________________________________________________________________________________________________ 

           ___________________________________________175__________________________________________________________________________ 
 4zrg(A) : VMLQPAPQDVGKSCGVDFEIKAFATHSTDVEEDKIPKKSSVRLLIEKVQHAPRDMGPQPRAEASWQFFMSDKPLRLAVSLSKEIYYHGEPIPVTVAVTNSTEKTVKKIKVLVEQVTNVVL 
         :                                                                                                                          
 4j2q(B) : VMLQPAPQDVGKSCGVDFEIKAFATHSTD-----iPKKSSVRLLIRKVQHAPRDMGPQPRAEASWQFFMSDKPLRLAVSLSKEIYYHGEPIPVTVAVTNSTEKTVKKIKVLVEQVTNVVL 
           ___________________________________________175__________________________________________________________________________ 

           ___________________________________________295____________310_________322______________________________________          
 4zrg(A) : YSSDYYIKTVAAEEAQEKVPPNSSLTKTLTLVPLLANNRERRGIALDGKIKHEDTNLASSTIIKEGIDKTVMGILVSYQIKVKLTVSGLLGELTSSEVATEVPFRLMHPQP          
         :                                                                                                                          
 4j2q(B) : YSSDYYIKTVAAEEAQEKVPPNSSLTKTLTLVPLLANNRERRGIALDGKIKHEDTNLASSTIIKEGIDKTVMGILVSYQIKVKLTVSGLLGELTSSEVATEVPFRLMHPQP          
           ___________________________________________295____________310_________322______________________________________          

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		20.3
Translation
(A) 		-1.1
Closure
(%) 		10.5
Bending Residues
( green ) 		  175 - 176
  295 - 302
  310 - 313
  322 - 324
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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