Ketohexokinase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Ketohexokinase
  Conformer 1
(PDB) 		2hlz (A)
  Conformer 2
(PDB) 		3nbv (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 247 0.78   5 - 12   15 - 15   38 - 96   115 - 296
2 42 1.06   13 - 14   16 - 37   97 - 114

Sequence


           _____________12_______________________37____________________________________________________91___________________113____ 
 2hlz(A) : *****GSQILCVGLVVLDVISLVDKYPKEDSEIRCLSQRWQRGGNASNSCTILSLLGAPCAF-gS-aPGHVADFVLDDLRRYSVDLRYTVFQTTGSVPIATVIINEASGSRTILYYDRSL 
         :                                                                                                                          
 3nbv(B) : GLVPRGSQILCVGLVVLDVISLVDKYPKEDSEIRCLSQRWQRGGNASNSCTVLSLLGAPCAFMGSMAPGHVADFLVADFRRRGVDVSQVAWQSKGDTPSSCCIINNSNGNRTIVLHDTSL 
           _____________12_______________________37____________________________________________________91___________________113____ 

           ________________________________________________________________________________________________________________________ 
 2hlz(A) : PDVSATDFEKVDLTQFKWIHIEGRNASEQVK-lQRIDAHNTRQPPEQKIRVSVEVEKPREELFQLFGYGDVVFVSKDVAKHLGFQSAEEALRGLYGRVRKGAVLVCAWAEEGADALGPDG 
         :                                                                                                                          
 3nbv(B) : PDVSATDFEKVDLTQFKWIHIEGRNASEQVKMLQRIDAHNTRQPPEQKIRVSVEVEKPREELFQLFGYGDVVFVSKDVAKHLGFQSAEEALRGLYGRVRKGAVLVCAWAEEGADALGPDG 
           ________________________________________________________________________________________________________________________ 

           _____________________________________________________________                                                            
 2hlz(A) : KLLHSDAFPPPRVVDTLGAGDTFNASVIFSLSQGRSVQEALRFGCQVAGKKCGLQGFDGIV                                                            
         :                                                                                                                          
 3nbv(B) : KLLHSDAFPPPRVVDTLGAGDTFNASVIFSLSQGRSVQEALRFGCQVAGKKCGLQGFDGIV                                                            
           _____________________________________________________________                                                            

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		26.9
Translation
(A) 		0.4
Closure
(%) 		72.1
Bending Residues
( green ) 		  12 - 16
  37 - 40
  91 - 97
  113 - 115
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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