Heat Shock Locus U

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Heat Shock Locus U
  Conformer 1
(PDB) 		1do2 (B)
  Conformer 2
(PDB) 		1g41 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 224 1.26   4 - 335
2 106 0.95   336 - 441

Sequence


           ________________________________________________________________________________________________________________________ 
 1do2(B) : SEMTPREIVSELDKHIIGQDNAKRSVAIALRNRWRRMQLNEELRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRDLTDAAVKMVRVQAIEKNRY 
         :                                                                                                                          
 1g41(A) : SEMTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFT----vGKEVDSIIRDLTDSAMKLVRQQEIAKNR- 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 1do2(B) : RAEELAEERILDVLIPPAKNNWGQTEQQQEPSAARQAFRKKLREGQLDDKEIEkQKARKLKIKDAMKLLIEEEAAKLVNPEELKQDAIDAVEQHGIVFIDEIDKICKRGESSGPDVSREG 
         :                                                                                                                          
 1g41(A) : --------------------------------------------------------------------lIDDEAAKLINPEELKQKAIDAVEQNGIVFIDEIDKICKKGEYSGADVSREG 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________335_____________________________________________________________ 
 1do2(B) : VQRDLLPLVEGCTVSTKHGMVKTDHILFIASGAFQIAKPSDLIPELQGRLPIRVELQALTTSDFERILTEPNASITVQYKALMATEGVNIEFTDSGIKRIAEAAWQVNESTENIGARRLH 
         :                                                                                                                          
 1g41(A) : VQRDLLPLVEGSTVSTKHGMVKTDHILFIASGAFQVARPSDLIPELQGRLPIRVELTALSAADFERILTEPHASLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNEKTENIGARRLH 
           ________________________________________________________336_____________________________________________________________ 

           _______________________________________________                                                                          
 1do2(B) : TVLERLMEEISYDASDLSGQNITIDADYVSKHLDALVADEDLSRFIL                                                                          
         :                                                                                                                          
 1g41(A) : TVMERLMDKISFSASDMNGQTVNIDAAYVADALGEVVENEDLSRFIL                                                                          
           _______________________________________________                                                                          

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		20.8
Translation
(A) 		0.1
Closure
(%) 		68.9
Bending Residues
( green ) 		  335 - 336
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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