Pvu II

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Pvu II
  Conformer 1
(PDB) 		1pvu (B)
  Conformer 2
(PDB) 		1eyu (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 106 1.17   47 - 155
2 43 0.64   4 - 46

Sequence


           ________________________________________43______________________________________________________________________________ 
 1pvu(B) : SHPDLNKLLELWPHIQEYQDLALKHGINDIFQDNGGKLLQVLLITGLTVLPGgNDAVDNAGQEYELKSINIDLTKGFSTHHHMNPVIIAKYRQVPWIFAIYRGIAIEAIYRLEPKDLEFY 
         :                                                                                                                          
 1eyu(B) : SHPDLNKLLELWPHIQEYQDLALKHGINDIFQDNGGKLLQVLLITGLTVLPg-NDAVDNAGQEYELKSINIDLTKGFSTHHHMNPVIIAKYRQVPWIFAIYRGIAIEAIYRLEPKDLEFY 
           ________________________________________43______________________________________________________________________________ 

           __________________________________                                                                                       
 1pvu(B) : YDKWERKWYSDGHKDINNPKIPVKYVMEHGTKIY                                                                                       
         :                                                                                                                          
 1eyu(B) : YDKWERKWYSDGHKDINNPKIPVKYVMEHGTKIY                                                                                       
           __________________________________                                                                                       

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		22.6
Translation
(A) 		-0.5
Closure
(%) 		92.2
Bending Residues
( green ) 		  43 - 47
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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