Vimentin

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Vimentin
  Conformer 1
(PDB) 		3uf1 (C)
  Conformer 2
(PDB) 		3uf1 (D)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 70 1.76   145 - 217
2 27 0.49   218 - 244

Sequence


           __________________________________________________________________________217_______________________________             
 3uf1(C) : *HHHSHsRLGDLYEEErELRRQVDQLTNDKARVEVERDNLAEDIrLREKLQEElQREEAENTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHEEEIQELQ**             
         :                                                                                                                          
 3uf1(D) : HHHHSHsRLGDLYEEErELRRQVDQLTNDKARVEVERDNLAEDIrLREKLQEElQREEAENTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHEEEIQELQAQ             
           __________________________________________________________________________217_______________________________             

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		21.9
Translation
(A) 		-0.4
Closure
(%) 		81.2
Bending Residues
( green ) 		  217 - 218
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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