Camp-Dependent Protein Kinase (E.C.2.7.1.37)

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Camp-Dependent Protein Kinase (E.C.2.7.1.37)
  Conformer 1
(PDB)
1atp (E)
  Conformer 2
(PDB)
1j3h (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 215 0.66   17 - 26   31 - 31   33 - 33   93 - 104   124 - 316
2 95 1.03   27 - 30   32 - 32   34 - 92   105 - 123   336 - 348

Sequence


           ________________26__30____________________________________________________________92_________104________________123_____ 
 1atp(E) : ******VKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM 
         :                                                                                                                          
 1j3h(A) : GSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM 
           ________________26__30____________________________________________________________92_________104________________123_____ 

           ________________________________________________________________________________________________________________________ 
 1atp(E) : FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE 
         :                                                                                                                          
 1j3h(A) : FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWl--gTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE 
           ________________________________________________________________________________________________________________________ 

           _________________________________________________________________316__________________________________                   
 1atp(E) : KIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRVSINEKCGKEFTEF                   
         :                                                                                                                          
 1j3h(A) : KIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKF----------dYEEEEIRV-iNEKCGKEFTEF                   
           _________________________________________________________________316__________________________________                   

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
For more advanced options, right click on the model.


Show console


play backwards pause play forwards

Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
18.2
Translation
(A)
0.7
Closure
(%)
92.9
Bending Residues
( green )
  26 - 27
  30 - 34
  92 - 93
  104 - 105
  123 - 125
  316 - 336
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

Download and extract PyMOL PML script file Download