Cell Division Protein Ftsh

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Cell Division Protein Ftsh
  Conformer 1
(PDB)
3kds (E)
  Conformer 2
(PDB)
2ce7 (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 234 9.38   332 - 334   336 - 601
2 165 0.65   158 - 331   335 - 335

Sequence


           ________________________________________________________________________________________________________________________ 
 3kds(E) : ******KRVTFKDVGGAEEAIEELKEVVEFLKDPSKFNRIGARMPKGILLVGPPGTGATLLARAVAGEANVPFFHISGSDFVELFVGVGAARVRDLFAQAKAHAPCIVFIDEIDAVGRhD 
         :                                                                                                                          
 2ce7(B) : YKPSGNKRVTFKDVGGAEEAIEELKEVVEFLKDPSKFNRIGARMPKGILLVGPPGTGKTLLARAVAGEANVPFFHISGSDFVELFVGVGAARVRDLFAQAKAHAPCIVFIDEIDAVGR-d 
           ________________________________________________________________________________________________________________________ 

           ___________________________________________324_______334________________________________________________________________ 
 3kds(E) : EREQTLNQLLVEMDGFDSKEGIIVMAATNRPDILDPALLRPGRFDKKIVVDPPDMLGRKKILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAAREGRDKITMKDFEEAI 
         :                                                                                                                          
 2ce7(B) : EREQTLNQLLVEMDGFDSKEGIIVMAATNRPDILDPALLRPGRFDKKIVVDPPDMLGRKKILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAAREGRDKITMKDFEEAI 
           ___________________________________________324_______334________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 3kds(E) : DRVIAGPARKSLLISPAEKRIIAYHEAGHAVVSTVVPNGEPVHRISIIPRGYKALGYTLHLPEEDKYLVSRNELLDKLTALLGGRAAEEVVFGDVTSGAANDIERATEIARNMVCQLGMS 
         :                                                                                                                          
 2ce7(B) : DRVIAGP----lLISPAEKRIIAYHEAGHAVVSTVVPNGEPVHRISII------------------yLVSRNELLDKLTALLGGRAAEEVVFGDVTSGAANDIERATEIARNMVCQLGMS 
           ________________________________________________________________________________________________________________________ 

           ___________________________________________________________________________                                              
 3kds(E) : EELGPLAWGKrLRNYSEEVASKIDEEVKKIVTNCYERAKEIIRKYRKQLDNIVEILLEKETIEGDELRRILSE**                                              
         :                                                                                                                          
 2ce7(B) : EELGPLAWGK-lRNYSEEVASKIDEEVKKIVTNCYERAKEIIRKYRKQLDNIVEILLEKETIEGDELRRILSEEF                                              
           ___________________________________________________________________________                                              

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
For more advanced options, right click on the model.


Show console


play backwards pause play forwards

Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
36.9
Translation
(A)
4.7
Closure
(%)
53.3
Bending Residues
( green )
  324 - 332
  334 - 336
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

Download and extract PyMOL PML script file Download