Elongation Factor Tu

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Elongation Factor Tu
  Conformer 1
(PDB)
1tui (A)
  Conformer 2
(PDB)
1ob5 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 206 4.07   11 - 216
2 187 1.1   217 - 403

Sequence


           ________________________________________________________________________________________________________________________ 
 1tui(A) : ***KPHVNVGTIGHVDHGKTTLTAALTYVAAAENPNVEVKDYGDIDKAPEERARGITINTAHVEYETAKRHYSHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQ 
         :                                                                                                                          
 1ob5(A) : IRTKPHVNVGTIGHVDHGKTTLTAALTYVAAAENPNVEVKDYGDIDKAPEERARGITINTAHVEYETAKRHYSHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQ 
           ________________________________________________________________________________________________________________________ 

           _______________________________________________________________________________________215______________________________ 
 1tui(A) : VGVPYIVVFMNKVDMVDDPELLDLVEMEVRDLLNQYEFPGDEVPVIRGSALLALEEMHKNPKTKRGENEWVDKIWELLDAIDEYIPTPVRDVDKPFLMPVEDVFTITGRGTVATGRIERG 
         :                                                                                                                          
 1ob5(A) : VGVPYIVVFMNKVDMVDDPELLDLVEMEVRDLLNQYEFPGDEVPVIRGSALLALEEMHKNPKTKRGENEWVDKIWELLDAIDEYIPTPVRDVDKPFLMPVEDVFTITGRGTVATGRIERG 
           _______________________________________________________________________________________215______________________________ 

           ________________________________________________________________________________________________________________________ 
 1tui(A) : KVKVGDEVEIVGLAPETRKTVVTGVEMHRKTLQEGIAGDNVGLLLRGVSREEVERGQVLAKPGSITPHTKFEASVYILKKEEGGRHTGFFTGYRPQFYFRTTDVTGVVRLPQGVEMVMPG 
         :                                                                                                                          
 1ob5(A) : KVKVGDEVEIVGLAPETRKTVVTGVEMHRKTLQEGIAGDNVGLLLRGVSREEVERGQVLAKPGSITPHTKFEASVYILKKEEGGRHTGFFTGYRPQFYFRTTDVTGVVRLPQGVEMVMPG 
           ________________________________________________________________________________________________________________________ 

           ________________________________________                                                                                 
 1tui(A) : DNVTFTVELIKPVALEEGLRFAIREGGRTVGAGVVTKILE                                                                                 
         :                                                                                                                          
 1ob5(A) : DNVTFTVELIKPVALEEGLRFAIREGGRTVGAGVVTKILE                                                                                 
           ________________________________________                                                                                 

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
91.9
Translation
(A)
3.0
Closure
(%)
91.3
Bending Residues
( green )
  215 - 217
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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