Elongation Factor Tu (Ef-Tu)

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Elongation Factor Tu (Ef-Tu)
  Conformer 1
(PDB)
2wrq (Z)
  Conformer 2
(PDB)
2c78 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 190 1.08   214 - 403
2 179 1.12   11 - 213

Sequence


           ________________________________________________________________________________________________________________________ 
 2wrq(Z) : TKPHVNVGTIGHVDHGKTTLTAALTYVAAAENPNV------------------------hVEYETAKRHYSHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVG 
         :                                                                                                                          
 2c78(A) : *KPHVNVGTIGHVDHGKTTLTAALTYVAAAENPNVEVKDYGDIDKAPEERARGITINTAHVEYETAKRHYSHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVG 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________________________________210_____________________________________ 
 2wrq(Z) : VPYIVVFMNKVDMVDDPELLDLVEMEVRDLLNQYEFPGDEVPVIRGSALLALEQMHRNPKTRRGENEWVDKIWELLDAIDEYIPTPVRDVDKPFLMPVEDVFTITGRGTVATGRIERGKV 
         :                                                                                                                          
 2c78(A) : VPYIVVFMNKVDMVDDPELLDLVEMEVRDLLNQYEFPGDEVPVIRGSALLALEQMHRNPKTRRGENEWVDKIWELLDAIDEYIPTPVRDVDKPFLMPVEDVFTITGRGTVATGRIERGKV 
           ________________________________________________________________________________210_____________________________________ 

           ________________________________________________________________________________________________________________________ 
 2wrq(Z) : KVGDEVEIVGLAPETRRTVVTGVEMHRKTLQEGIAGDNVGVLLRGVSREEVERGQVLAKPGSITPHTKFEASVYVLKKEEGGRHTGFFSGYRPQFYFRTTDVTGVVQLPPGVEMVMPGDN 
         :                                                                                                                          
 2c78(A) : KVGDEVEIVGLAPETRKTVVTGVEMHRKTLQEGIAGDNVGVLLRGVSREEVERGQVLAKPGSITPHTKFEASVYVLKKEEGGRHTGFFSGYRPQFYFRTTDVTGVVQLPPGVEMVMPGDN 
           ________________________________________________________________________________________________________________________ 

           ______________________________________                                                                                   
 2wrq(Z) : VTFTVELIKPVALEEGLRFAIREGGRTVGAGVVTKILE                                                                                   
         :                                                                                                                          
 2c78(A) : VTFTVELIKPVALEEGLRFAIREGGRTVGAGVVTKILE                                                                                   
           ______________________________________                                                                                   

Morph

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Status: Initialising

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
33.1
Translation
(A)
3.2
Closure
(%)
96.6
Bending Residues
( green )
  210 - 216
Bending Region Analysis

Dynamic Contact Graph

The dynamic contact graph is still being generated. Progress: Initialising

PyMOL Script

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