Endo-1,4-Beta-Xylanase A

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Endo-1,4-Beta-Xylanase A
  Conformer 1
(PDB)
2dcy (D)
  Conformer 2
(PDB)
2b46 (X)
  Window Length 15
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 151 0.52   8 - 109   130 - 178
2 20 0.4   110 - 129

Sequence


           _____________________________________________________________________________________________________104________________ 
 2dcy(D) : ASTDYWQNWTDGGGIVNAVNGSGGNYSVNWSNTGNFVVGKGWTTGSPFRTINYNAGVWAPNGNGYLTLYGWTRSPLIEYYVVDSWGTYRPTGTYKGTVKSDGGTYDIYTTTRYNAPSIDG 
         :                                                                                                                          
 2b46(X) : ASTDYWQNWTFGGGIVNAVNGSGGNYSVNWSNTGNFVVGKGWTTGSPFRTINYNAGVWAPNGNGYLTLYGWTRSPLIEYYVVDSWGTYRPTGTYKGTVKSDGGTYDIYTTTRYNAPSIDG 
           _____________________________________________________________________________________________________104________________ 

           ______129________________________________________________________                                                        
 2dcy(D) : DRTTFTQYWSVRQSKRPTGSNATITFSNHVNAWKSHGMNLGSNWAYQVMATEGYQSSGSSNVTVW                                                        
         :                                                                                                                          
 2b46(X) : DDTTFTQYWSVRQSKRPTGSNATITFSNHVNAWKSHGMNLGSNWAYQVMATEGYQSSGSSNVTVW                                                        
           ______129________________________________________________________                                                        

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
7.6
Translation
(A)
0.3
Closure
(%)
73.9
Bending Residues
( green )
  104 - 110
  129 - 133
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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