Cd45 Protein Tyrosine Phosphatase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Cd45 Protein Tyrosine Phosphatase
  Conformer 1
(PDB)
1ygr (A)
  Conformer 2
(PDB)
1ygu (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 285 0.42   602 - 892
2 271 0.68   893 - 1203

Sequence


           ________________________________________________________________________________________________________________________ 
 1ygr(A) : EKQLnVEPIHADILLETYKRKIADEGRPFLAEFQSIPRVFSKFPIKEARKPFNQNKNRYVDILPYDYNRVELSEINGDAGSNYINASYIDGFKEPRKYIAAQGPRDETVDDFWRiWEQKA 
         :                                                                                                                          
 1ygu(B) : *KQLnVEPIHADILLETYKRKIADEGRPFLAEFQSIPRVFSKFPIKEARKPFNQNKNRYVDILPYDYNRVELSEINGDAGSNYINASYIDGFKEPRKYIAAQGPRDETVDDFWRiWEQKA 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 1ygr(A) : TVIVvTRCEEGNRNKCAEYWPSeEGTRAFGDVVVKINQHKRCPDYIIQKLNIVNKKEKATGREVTHIQFTSWPDHGVPEDPHLLLKLRRRVNAFSNFFSGPIVVHSSAGVGRTGTYIGID 
         :                                                                                                                          
 1ygu(B) : TVIVvTRCEEGNRNKCAEYWPSeEGTRAFGDVVVKINQHKRCPDYIIQKLNIVNKKEKATGREVTHIQFTSWPDHGVPEDPHLLLKLRRRVNAFSNFFSGPIVVHSSAGVGRTGTYIGID 
           ________________________________________________________________________________________________________________________ 

           _____________________________________________892________________________________________________________________________ 
 1ygr(A) : AlEGLEAENKVDVYGYVVKLRRQRCLvQVEAQYILIHQALVEYNQFGETEVNLSELHPYLHNkKRDPPSEPSPLEAEFQRLPSYRSWRTQHIGNQEENKSKNRNSNVIPYDYNRVPLK-- 
         :                                                                                                                          
 1ygu(B) : AlEGLEAENKVDVYGYVVKLRRQRCLvQVEAQYILIHQALVEYNQFGETEVNLSELHPYLHNkKRDPPSEPSPLEAEFQRLPSYRSWRTQHIGNQEENKSKNRNSNVIPYDYNRVPLKHE 
           _____________________________________________892________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 1ygr(A) : sKYINASFIsYWKPEViAAQGPLKETIGDFWQiFQRKVKVIVlTELKHGDQEICAQYWGEGKQTYGDIEVDLKDTDKSSTYTLRVFELRHSKRKDSRTVYQYQYTNWSVEQLPAEPKELI 
         :                                                                                                                          
 1ygu(B) : sKYINASFIsYWKPEViAAQGPLKETIGDFWQiFQRKVKVIVlTELKHGDQEICAQYWGEGKQTYGDIEVDLKDTDKSSTYTLRVFELRHSKRKDSRTVYQYQYTNWSVEQLPAEPKELI 
           ________________________________________________________________________________________________________________________ 

           __________________________________________________________________________________________                               
 1ygr(A) : SiQVVKQKLPQKN-------hKSTPLLIHCRDGSQQTGIFCALLNLLESAETEEVVDIFQVVKALRKARLGvSTFEQYQFLYDVIASTYP                               
         :                                                                                                                          
 1ygu(B) : SiQVVKQKLPQKNSSEGNKHHKSTPLLIHCRDGSQQTGIFCALLNLLESAETEEVVDIFQVVKALRKARLGvSTFEQYQFLYDVIASTYP                               
           __________________________________________________________________________________________                               

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
8.6
Translation
(A)
-0.1
Closure
(%)
100.0
Bending Residues
( green )
  892 - 893
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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