Leucine Dehydrogenase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Leucine Dehydrogenase
  Conformer 1
(PDB)
1leh (B)
  Conformer 2
(PDB)
1leh (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 184 0.36   137 - 139   144 - 293   297 - 298   301 - 303   307 - 307   309 - 309   311 - 334
2 176 0.24   3 - 136   140 - 143   294 - 296   299 - 300   304 - 306   308 - 308   310 - 310   335 - 362

Sequence


           ________________________________________________________________________________________________________________________ 
 1leh(B) : MEIFKYMEKYDYEQLVFCQDEASGLKAVIAIHDTTLGPALGGARMWTYNAEEEAIEDALRLARGMTYKNAAAGLNLGGGKTVIIGDPFADKNEDMFRALGRFIQGLNGRYITAEDVGTTV 
         :                                                                                                                          
 1leh(A) : MEIFKYMEKYDYEQLVFCQDEASGLKAVIAIHDTTLGPALGGARMWTYNAEEEAIEDALRLARGMTYKNAAAGLNLGGGKTVIIGDPFADKNEDMFRALGRFIQGLNGRYITAEDVGTTV 
           ________________________________________________________________________________________________________________________ 

           _____________136________________________________________________________________________________________________________ 
 1leh(B) : DDMDLIHQETDYVTGISPAFGSSGNPSPVTAYGVYRGMKAAAKEAFGSDSLEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAVAPNAIYGVTCDIFAPCALG 
         :                                                                                                                          
 1leh(A) : DDMDLIHQETDYVTGISPAFGSSGNPSPVTAYGVYRGMKAAAKEAFGSDSLEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAVAPNAIYGVTCDIFAPCALG 
           _____________136________________________________________________________________________________________________________ 

           __________________________________________________293_______303____________________________334__________________________ 
 1leh(B) : AVLNDFTIPQLKAKVIAGSADNQLKDPRHGKYLHELGIVYAPDYVINAGGVINVADELYGYNRTRAMKRVDGIYDSIEKIFAISKRDGVPSYVAADRMAEERIAKVAKARSQFLQDQRNI 
         :                                                                                                                          
 1leh(A) : AVLNDFTIPQLKAKVIAGSADNQLKDPRHGKYLHELGIVYAPDYVINAGGVINVADELYGYNRTRAMKRVDGIYDSIEKIFAISKRDGVPSYVAADRMAEERIAKVAKARSQFLQDQRNI 
           __________________________________________________293_______303____________________________334__________________________ 

           ____                                                                                                                     
 1leh(B) : LNGR                                                                                                                     
         :                                                                                                                          
 1leh(A) : LNGR                                                                                                                     
           ____                                                                                                                     

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
For more advanced options, right click on the model.


Show console


play backwards pause play forwards

Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
5.5
Translation
(A)
0.0
Closure
(%)
69.7
Bending Residues
( green )
  136 - 137
  139 - 144
  293 - 294
  296 - 301
  303 - 304
  306 - 311
  334 - 335
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

Download and extract PyMOL PML script file Download