Adenosylhomocysteinase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Adenosylhomocysteinase
  Conformer 1
(PDB)
3x2e (B)
  Conformer 2
(PDB)
3x2f (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 224 0.88   5 - 176   337 - 388
2 160 0.52   177 - 336

Sequence


           ________________________________________________________________________________________________________________________ 
 3x2e(B) : ANTGEMKINWVSRYMPLLNKIAEEYSREKPLSGFTVGMSIHLEAKTAYLAITLSKLGAKVVITGSNPLSTQDDVAEALRSKGITVYARRTHDESIYRENLMKVLDERPDFIIDDGGDLTV 
         :                                                                                                                          
 3x2f(A) : *NTGEMKINWVSRYMPLLNKIAEEYSREKPLSGFTVGMSIHLEAKTAYLAITLSKLGAKVVITGSNPLSTQDDVAEALRSKGITVYARRTHDESIYRENLMKVLDERPDFIIDDGGDLTV 
           ________________________________________________________________________________________________________________________ 

           ___________________________________________167__________________________________________________________________________ 
 3x2e(B) : ISHTEREEVLENLKGVSEETTTGVRRLKALEETGKLRVPVIAVNDSKMKYLFDNRYGTGQSTWDAIMRNTNLLVAGKNVVVAGYGWCGRGIALRAAGLGARVIVTEVDPVKAVEAIMDGF 
         :                                                                                                                          
 3x2f(A) : ISHTEREEVLENLKGVSEETTTGVRRLKALEETGKLRVPVIAVNDSKMKYLFDNRYGTGQSTWDAIMRNTNLLVAGKNVVVAGYGWCGRGIALRAAGLGARVIVTEVDPVKAVEAIMDGF 
           ___________________________________________167__________________________________________________________________________ 

           ____________________________________________________________________________________________336_________________________ 
 3x2e(B) : TVMPMKEAVKIADFVITASGNTDVLSKEDILSLKDGAVLANAGHFNVEIPVRVLEEIAVEKFEARPNVTGYTLENGKTVFLLAEGRLVNLAAGDGHPVEIMDLSFALQIFAVLYLLENHR 
         :                                                                                                                          
 3x2f(A) : TVMPMKEAVKIADFVITASGNTDVLSKEDILSLKDGAVLANAGHFNVEIPVRVLEEIAVEKFEARPNVTGYTLENGKTVFLLAEGRLVNLAAGDGHPVEIMDLSFALQIFAVLYLLENHR 
           ____________________________________________________________________________________________336_________________________ 

           _______________________________________________                                                                          
 3x2e(B) : KMSPKVYMLPDEIDERVARMKLDSLGVKIDELTEKQRRYLR******                                                                          
         :                                                                                                                          
 3x2f(A) : KMSPKVYMLPDEIDERVARMKLDSLGVKIDELTEKQRRYLRSWQHHH                                                                          
           _______________________________________________                                                                          

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
14.2
Translation
(A)
-0.7
Closure
(%)
92.3
Bending Residues
( green )
  167 - 183
  336 - 337
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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