Arginine Kinase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Arginine Kinase
  Conformer 1
(PDB)
1m15 (A)
  Conformer 2
(PDB)
1m80 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 188 1.2   4 - 98   129 - 156   164 - 172   187 - 212   220 - 230   258 - 276
2 152 2.22   99 - 128   157 - 163   173 - 186   213 - 219   231 - 257   277 - 355

Sequence


           _______________________________________________________________________________________________98_______________________ 
 1m15(A) : VDQATLDKLEAGFKKLQEASDCKSLLKKHLTKDVFDSIKNKKTGMGATLLDVIQSGVENLDSGVGIYAPDAESYRTFGPLFDPIIDDYHGGFKLTDKHPPKQWGDINTLVGLDPAGQFII 
         :                                                                                                                          
 1m80(A) : VDQATLDKLEAGFKKLQEASDCKSLLKKHLTKDVFDSIKNKKTGMGATLLDVIQSGVENLDSGVGIYAPDAESYRTFGPLFDPIIDDYHGGFKLTDKHPPKQWGDINTLVGLDPAGQFII 
           _______________________________________________________________________________________________98_______________________ 

           ____128_________________________156____163______172_____________________________________212____219________230___________ 
 1m15(A) : STRVRCGRSLQGYPFNPCLTAEQYKEMEEKVSSTLSSMEDELKGTYYPLTGMSKATQQQLIDDHFLFKEGDRFLQTANACRYWPTGRGIFHNDAKTFLVWVNEEDHLRIISMQKGGDLKT 
         :                                                                                                                          
 1m80(A) : STRVRCGRSLQGYPFNPCLTAEQYKEMEEKVSSTLSSMEDELKGTYYPLTGMSKATQQQLIDDHFLFKEGDRFLQTANACRYWPTGRGIFHNDAKTFLVWVNEEDHLRIISMQKGGDLKT 
           ____128_________________________156____163______172_____________________________________212____219________230___________ 

           ____________256_________________276_________________________________________________________________________________     
 1m15(A) : VYKRLVTAVDNIESKLPFSHDDRFGFLTFCPTNLGTTMRASVHIQLPKLAKDRKVLEDIASKFNLQVRGTRGEHTESEGGVYDISNKRRLGLTEYQAVREMQDGILEMIKMEKAAA     
         :                                                                                                                          
 1m80(A) : VYKRLVTAVDNIESKLPFSHDDRFGFLTFCPTNLGTTMRASVHIQLPKLAKDRKVLEDIASKFNLQV------------gVYDISNKRRLGLTEYQAVREMQDGILEMIKMEKAAA     
           ____________256_________________276_________________________________________________________________________________     

Morph

Morph animation in progress.
Status: Initialising

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
17.5
Translation
(A)
0.3
Closure
(%)
92.3
Bending Residues
( green )
  98 - 99
  128 - 129
  156 - 157
  163 - 164
  172 - 187
  212 - 213
  219 - 220
  230 - 231
  256 - 258
  276 - 277
Bending Region Analysis

Dynamic Contact Graph

The dynamic contact graph is still being generated. Progress: Initialising

PyMOL Script

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