Arginine Kinase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Arginine Kinase
  Conformer 1
(PDB)
3m10 (A)
  Conformer 2
(PDB)
1bg0 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 198 1.21   4 - 98   127 - 156   161 - 161   164 - 172   186 - 212   218 - 230   252 - 254   258 - 277
2 145 2.58   99 - 126   157 - 160   162 - 163   173 - 185   213 - 217   231 - 251   255 - 257   278 - 355

Sequence


           _______________________________________________________________________________________________98_______________________ 
 3m10(A) : VDQATLDKLEAGFKKLQEASDCKSLLKKHLTKDVFDSIKNKKTGMGATLLDVIQSGVENLDSGVGIYAPDAESYRTFGPLFDPIIDDYHGGFKLTDKHPPKQWGDINTLVGLDPAGQFII 
         :                                                                                                                          
 1bg0(A) : VDQATLDKLEAGFKKLQEASDCKSLLKKHLTKDVFDSIKNKKTGMGATLLDVIQSGVENLDSGVGIYAPDAESYRTFGPLFDPIIDDYHGGFKLTDKHPPKQWGDINTLVGLDPAGQFII 
           _______________________________________________________________________________________________98_______________________ 

           __126___________________________156_160_________172____________________________________211___217__________230___________ 
 3m10(A) : STRVRCGRSLQGYPFNPCLTAEQYKEMEEKVSSTLSSMEDELKGTYYPLTGMSKATQQQLIDDHFLFKEGDRFLQTANACRYWPTGRGIFHNDAKTFLVWVNEEDHLRIISMQKGGDLKT 
         :                                                                                                                          
 1bg0(A) : STRVRCGRSLQGYPFNPCLTAEQYKEMEEKVSSTLSSMEDELKGTYYPLTGMSKATQQQLIDDHFLFKEGDRFLQTANACRYWPTGRGIFHNDAKTFLVWVNEEDHLRIISMQKGGDLKT 
           __126___________________________156_160_________172____________________________________211___217__________230___________ 

           _______251_______________________277________________________________________________________________________________     
 3m10(A) : VYKRLVTAVDNIESKLPFSHDDRFGFLTFCPTNLGTTMRASVHIQLPKLAKDRKVLEDIASKFNLQVRG---------gGVYDISNKRRLGLTEYQAVREMQDGILEMIKMEKAAA     
         :                                                                                                                          
 1bg0(A) : VYKRLVTAVDNIESKLPFSHDDRFGFLTFCPTNLGTTMRASVHIQLPKLAKDRKVLEDIASKFNLQVRGTRGEHTESEGGVYDISNKRRLGLTEYQAVREMQDGILEMIKMEKAAA     
           _______251_______________________277________________________________________________________________________________     

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
18.2
Translation
(A)
0.5
Closure
(%)
93.5
Bending Residues
( green )
  98 - 99
  126 - 127
  156 - 157
  160 - 164
  172 - 186
  211 - 213
  217 - 218
  230 - 231
  251 - 258
  277 - 278
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Mixed

PyMOL Script

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