14-3-3 Beta/alpha

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name 14-3-3 Beta/alpha
  Conformer 1
(PDB)
2c23 (A)
  Conformer 2
(PDB)
2btp (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 176 0.74   5 - 185
2 45 1.02   186 - 230

Sequence


           ________________________________________________________________________________________________________________________ 
 2c23(A) : **********************MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWRVISSIEQK-kKQQMGKEYREKIEAELQDICNDVLELLD 
         :                                                                                                                          
 2btp(A) : MHHHHHHSSGVDLGTENLYFQSMEKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWRVISSIEQKTkKLQLIKDYREKVESELRSICTTVLELLD 
           ________________________________________________________________________________________________________________________ 

           ______________________________________________________________________________185_______________________________________ 
 2c23(A) : KYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLR 
         :                                                                                                                          
 2btp(A) : KYLIANATNPESKVFYLKMKGDYFRYLAEVACGDDRKQTIDNSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLR 
           ______________________________________________________________________________183_______________________________________ 

           ________                                                                                                                 
 2c23(A) : DNLTLWTS                                                                                                                 
         :                                                                                                                          
 2btp(A) : DNLTLWTS                                                                                                                 
           ________                                                                                                                 

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
10.8
Translation
(A)
-0.8
Closure
(%)
97.7
Bending Residues
( green )
  185 - 186
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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