Cell Division Protein Ftsa

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Cell Division Protein Ftsa
  Conformer 1
(PDB)
1e4f (T)
  Conformer 2
(PDB)
1e4g (T)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 304 0.95   9 - 89   122 - 122   127 - 131   133 - 135   163 - 164   167 - 388
2 64 1.11   90 - 121   123 - 126   132 - 132   136 - 162   165 - 166

Sequence


           __________________________________________________________________________________89_____________________________121____ 
 1e4f(T) : *TVFYTSIDIGSRYIKGLVLGKRDQEWEALAFSSVKSRGLDEGEIKDAIAFKESVNTLLKELEEQLQKSLRSDFVISFSSVSFEREDTVIERDFGEEKRSITLDILSEMQSEALEKLKEN 
         :                                                                                                                          
 1e4g(T) : KTVFYTSIDIGSRYIKGLVLGKRDQEWEALAFSSVKSRGLDEGEIKDAIAFKESVNTLLKELEEQLQKSLRSDFVISFSSVSFEREDTVIERDFGEEKRSITLDILSE-qSEALEKLKEN 
           __________________________________________________________________________________89_____________________________121____ 

           ___131____________________________162___________________________________________________________________________________ 
 1e4f(T) : GKTPLHIFSKRYLLDDERIVFNPLDMKASKIAIEYTSIVVPLKVYEMFYNFLQDTVKSPFQLKSSLVSTAEGVLTTPEKDRGVVVVNLGYNFTGLIAYKNGVPIKISYVPVGMKHVIKDV 
         :                                                                                                                          
 1e4g(T) : GKTPLHIFSKRYLLDDERIVFNPLD-kASKIAIEYTSIVVPLKVYE-fYNFLQDTVKSPFQLKSSLVSTAEGVLTTPEKDRGVVVVNLGYNFTGLIAYKNGVPIKISYVPVG-kHVIKDV 
           ___131____________________________162___________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 1e4f(T) : SAVLDTSFEESERLIITHGNAVYNDLKEEEIQYRGLDGNTIKTTTAKKLSVIIHARLREIMSKSKKFFREVEAKIgIPGGVVLTGGGAKIPRINELATEVFKSPVRTGCYANSDRPSIIN 
         :                                                                                                                          
 1e4g(T) : SAVLDTSFEESERLIITHGNAVYNDLKEEEIQYRGLDGNTIKTTTAKKLSVIIHARLREI-sKSKKFFREVEAK-gIPGGVVLTGGGAKIPRINELATEVFKSPVRTGCYANSDRPSIIN 
           ________________________________________________________________________________________________________________________ 

           _____________________                                                                                                    
 1e4f(T) : ADEVANDPSFAAAFGNVFA**                                                                                                    
         :                                                                                                                          
 1e4g(T) : ADEVANDPSFAAAFGNVFAVS                                                                                                    
           _____________________                                                                                                    

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
13.1
Translation
(A)
0.5
Closure
(%)
66.2
Bending Residues
( green )
  89 - 90
  121 - 128
  131 - 137
  162 - 170
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Mixed

PyMOL Script

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