Death-Associated Protein Kinase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Death-Associated Protein Kinase
  Conformer 1
(PDB)
1jks (A)
  Conformer 2
(PDB)
1jkt (A)
  Window Length 7
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 244 1.33   9 - 97   107 - 145   159 - 274
2 22 0.82   98 - 106   146 - 158

Sequence


           ______________________________________________________________________________________________97______106_______________ 
 1jks(A) : TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK 
         :                                                                                                                          
 1jkt(A) : TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK 
           ______________________________________________________________________________________________97______106_______________ 

           _____________________145__________158___________________________________________________________________________________ 
 1jks(A) : QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 
         :                                                                                                                          
 1jkt(A) : QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 
           _____________________145__________158___________________________________________________________________________________ 

           ________________________________________                                                                                 
 1jks(A) : SNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPpQFE                                                                                 
         :                                                                                                                          
 1jkt(A) : SNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP****                                                                                 
           ________________________________________                                                                                 

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
17.9
Translation
(A)
0.4
Closure
(%)
83.9
Bending Residues
( green )
  97 - 98
  106 - 109
  145 - 146
  158 - 159
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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