2,4-Dienoyl-Coa Reductase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name 2,4-Dienoyl-Coa Reductase
  Conformer 1
(PDB)
1h0k (A)
  Conformer 2
(PDB)
1h0k (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 208 0.38   101 - 103   145 - 332   335 - 351
2 152 0.32   25 - 100   104 - 144   333 - 334   352 - 384

Sequence


           ___________________________________________________________________________100_________________________________________1 
 1h0k(A) : MITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPINPSDINQIQGVYPSKPAKTTGFGTAEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDD 
         :                                                                                                                          
 1h0k(B) : MITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPINPSDINQIQGVYPSKPAKTTGFGTAEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDD 
           ___________________________________________________________________________100_________________________________________1 

           44______________________________________________________________________________________________________________________ 
 1h0k(A) : FIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSKEFGPTIKEWIK 
         :                                                                                                                          
 1h0k(B) : FIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSKEFGPTIKEWIK 
           44______________________________________________________________________________________________________________________ 

           ___________________________________________________________________332________________351_______________________________ 
 1h0k(A) : QSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGKLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQ 
         :                                                                                                                          
 1h0k(B) : QSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGKLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQ 
           ___________________________________________________________________332________________351_______________________________ 

           ____                                                                                                                     
 1h0k(A) : LITY                                                                                                                     
         :                                                                                                                          
 1h0k(B) : LITY                                                                                                                     
           ____                                                                                                                     

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
4.2
Translation
(A)
0.3
Closure
(%)
39.1
Bending Residues
( green )
  100 - 101
  103 - 104
  144 - 145
  332 - 335
  351 - 352
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Mixed

PyMOL Script

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