Dtale2

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Dtale2
  Conformer 1
(PDB)
4hpz (A)
  Conformer 2
(PDB)
4osh (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 131 0.99   371 - 373   381 - 485   490 - 503   505 - 513
2 144 1.03   234 - 370   374 - 380
3 71 1.4   486 - 489   504 - 504   514 - 579

Sequence


           ________________________________________________________________________________________________________________________ 
 4hpz(A) : DLRTLGYSQQQQEKIKPKVRSTVAQHHEALVGHGFTHAHIVALSQHPAALGTVAVKYQDMIAALPEATHEAIVGVGKQWSGACALEALLTVAGELRGPPLQLDTGQLLKIAKRGGVTAVE 
         :                                                                                                                          
 4osh(A) : ******************************************************************************WSGARALEALLTVAGELRGPPLQLDTGQLLKIAKRGGVTAVE 
           ________________________________________________________________________________________________________________________ 

           ______________________________________________________________________________________________370_______380_____________ 
 4hpz(A) : VHHTWRNALTGAPLNLTPDQVVAIASNIGGKQALETVQRLLPVLCQDHGLTPQQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPDQVVAIASHDGGKQALETVQRLLPVLCQDHGLTP 
         :                                                                                                                          
 4osh(A) : AVHAWRNALTGAPLNLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPQQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQALLPVLCQAHGLTP 
           ______________________________________________________________________________________________370_______380_____________ 

           _________________________________________________________________________________________485_489___________503_______513 
 4hpz(A) : QQVVAIASNIGGKQALETVQRLLPVLCQDHGLTPDQVVAIASNDGGKQALETVQRLLPVLCQDHGLTPEQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPDQVVAIASHDGGKQALET 
         :                                                                                                                          
 4osh(A) : EQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPQQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPQQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPQQVVAIASNIGGKQALET 
           _________________________________________________________________________________________485_489___________503_______513 

           ________________________________________________________________________________________________________________________ 
 4hpz(A) : VQRLLPVLCQDHGLTPAQAVAIANNNGGKQALETVQRLLPVLCQDHGLTPDQVVAIASNGGGKQALESIVAQ************************************************ 
         :                                                                                                                          
 4osh(A) : VQRLLPVLCQAHGLTPQQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPQQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPEQ 
           ________________________________________________________________________________________________________________________ 

           _____________________________________________________________________________________                                    
 4hpz(A) : *************************************************************************************                                    
         :                                                                                                                          
 4osh(A) : VVAIASHDGGKQALETVQRLLPVLCQAHGLTPQQVVAIASNGGGRPALESIVAQLSRPDPALAALTNDHLVALACLGGRPALDAV                                    
           _____________________________________________________________________________________                                    

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
For more advanced options, right click on the model.


Show console


play backwards pause play forwards

Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
17.4
Translation
(A)
-0.9
Closure
(%)
57.0
Bending Residues
( green )
  370 - 371
  373 - 374
  380 - 381
Bending Region Analysis
Property Value
Fixed Domain
( blue )
1
Moving Domain
( yellow )
3
Rotation Angle
(deg)
20.8
Translation
(A)
-0.7
Closure
(%)
30.4
Bending Residues
( green )
  485 - 486
  489 - 491
  503 - 505
  513 - 514
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

Conformer 1 Contact:
Residue 1 ———› Residue 3

Conformer 2 Contact:
Residue 3 ———› Residue 1

Movement classification: Shear

PyMOL Script

Download and extract PyMOL PML script file Download