Folylpolyglutamate Synthase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Folylpolyglutamate Synthase
  Conformer 1
(PDB)
1jbv (A)
  Conformer 2
(PDB)
1jbw (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 294 0.63   3 - 296   298 - 299   314 - 317
2 98 1.03   297 - 297   300 - 313   318 - 423

Sequence


           ________________________________________________________________________________________________________________________ 
 1jbv(A) : MNYTETVAYIHSFP-----gDHRRILTLLHALGNPQQQGRYIHVTGTNGKGSAANAIAHVLEASGLTVGLYTSPFIMRFNERIMIDHEPIPDAALVNAVAFVRAALERLQQQQADFNVTE 
         :                                                                                                                          
 1jbw(A) : MNYTETVAYIHSFPRLAKTGDHRRILTLLHALGNPQQQGRYIHVTGTNGKGSAANAIAHVLEASGLTVGLYTSPFIMRFNERIMIDHEPIPDAALVNAVAFVRAALERLQQQQADFNVTE 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 1jbv(A) : FEFITALAYWYFRQRQVDVAVIEVGIGGDTDSTNVITPVVSVLTEVALDHQKLLGHTITAIAKHaGIIKRGIPVVTGNLVPDAAAVVAAKVATTGSQWLRFDRDFSVPKAKLHGWGQRFT 
         :                                                                                                                          
 1jbw(A) : FEFITALAYWYFRQRQVDVAVIEVGIGGDTDSTNVITPVVSVLTEVALDHQKLLGHTITAIAKHaGIIKRGIPVVTGNLVPDAAAVVAAKVATTGSQWLRFDRDFSVPKAKLHGWGQRFT 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________292__________________313________________________________________________ 
 1jbv(A) : YEDQDGRISDLEVPLVGDYQQRNMAIAIQTAKVYAKQTEWPLTPQNIRQGLAASHWPARLEKISDTPLIVIDGAHNPDGINGLITALKQLFSQPITVIAG--------aMADRLTAAFST 
         :                                                                                                                          
 1jbw(A) : YEDQDGRISDLEVPLVGDYQQRNMAIAIQTAKVYAKQTEWPLTPQNIRQGLAASHWPARLEKISDTPLIVIDGAHNPDGINGLITALKQLFSQPITVIAGILADKDYAAMADRLTAAFST 
           ________________________________________________292__________________313________________________________________________ 

           ________________________________________________________                                                                 
 1jbv(A) : VYLVPVPGTPRALPEArLKDSWQEALAASLNDVPDQPIVITGSLYLASAVRQTLLG                                                                 
         :                                                                                                                          
 1jbw(A) : VYLVPVPGT-------rLKDSWQEALAASLNDVPDQPIVITGSLYLASAVRQTLLG                                                                 
           ________________________________________________________                                                                 

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
For more advanced options, right click on the model.


Show console


play backwards pause play forwards

Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
13.8
Translation
(A)
-0.4
Closure
(%)
99.7
Bending Residues
( green )
  292 - 300
  313 - 323
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Mixed

PyMOL Script

Download and extract PyMOL PML script file Download