Glucansucrase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Glucansucrase
  Conformer 1
(PDB)
3klk (A)
  Conformer 2
(PDB)
3ttq (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 802 3.23   797 - 1618
2 28 7.17   758 - 787

Sequence


           ________________________________________________________________________________________________________________________ 
 3klk(A) : ************************************************************************************************************************ 
         :                                                                                                                          
 3ttq(A) : GLRQDSNGKLRYFDLTTGIQAKGQFVTIGQETYYFSKDHGDAQLLPMVTEGHYGTITtAWVYRDQNNTILKGLQNINGTLQFFDPYTGEQLKGGVAKYDDKLFYFESGKGNLVSTVAGDY 
           ________________________________________________________________________________________________________________________ 

           ______________________________________________________________________786_______________________________________________ 
 3klk(A) : ********************************QYYIDPTTGQPRKNFLLQNGNDWIYFDKDTGAGTNALKLQFDKGTISADEQYRRGNEAYSYDDKSIEN-VNGYLTADTWYRPKQILKD 
         :                                                                                                                          
 3ttq(A) : QDGHYISQDGQTRYADKQNQLVKGLVTVNGALQYFDNATGNQIKNQQVIVDGKTY-YFD-DKGNGEYLFTNTLDMST----NAFSTKNVAFNHDSSSFDHTVDGFLTADTWYRPKSILAN 
           _____________________________________________________________________1980_______________________________________________ 

           ________________________________________________________________________________________________________________________ 
 3klk(A) : GTTWTDSKETDMRPILMVWWPNTVTQAYYLNYMKQYGNLLPASLPSFSTDADSAELNHYSELVQQNIEKRISETGSTDWLRTLMHE-------FVTKNSMWNKDSENVDYGGLQLQGGFL 
         :                                                                                                                          
 3ttq(A) : GTTWRDSTDKDMRPLITVWWPNKNVQVNYLNFMKANGLLTTAA--QYTLHSDQYDLNQAAQDVQVAIERRIASEHGTDWLQKLLFESQNNNPSFVKQQFIWNKDSEYHGGGDAWFQGGYL 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 3klk(A) : KYVNSDLTKYANSDWRLMNRTATNIDGKNYGGAEFLLANDIDNSNPVVQAEELNWLYYLMNFGTITGNNPEANFDGIRVDAVDNVDVDLLSIARDYFNAAYNMEQSDASANKHINILEDW 
         :                                                                                                                          
 3ttq(A) : KYGNNPLTPTTNSDYRQ--------PGNAF---DFLLANDVDNSNPVVQAENLNWLHYLMNFGTITAGQDDANFDSIRIDAVDFIHNDTIQRTYDYLRDAYQVQQSEAKANQHISLVEA- 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 3klk(A) : GWDDPAYVNKIGNPQLTMDDRLRNAIMDTLSGAPDKNQALNKLITQ----SLV-NRANDNTENAVIPSYNFVRAHDSNAQDQIRQAIQAATGKPYGEFNLDDEKKGMEAYINDQNSTNKK 
         :                                                                                                                          
 3ttq(A) : GLD--AGTSTIHNDAL-IESNLREAATLSLTNEPGKNKPLTNMLQDVDGGTLITDHTQNSTENQATPNYSIIHAHDKGVQEKVGAAITDATGADWTNFTDEQLKAGLELFYKDQRATNKK 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 3klk(A) : WNLYNMPSAYTILLTNKDSVPRVYYGDLYQDGGQYMEHKTRYFDTITNLLKTRVKYVAGGQTMSVDKNGILTNVRFGKGAMNATDTGTDETRTEGIGVVISNNTNLKLNDGESVVLHMGA 
         :                                                                                                                          
 3ttq(A) : YNSYNIPSIYALMLTNKDTVPRMYYGDMYQDDGQYMANKSIYYDALVSLMTARKSYVSGGQTMSVDNHGLLKSVRFGKDAMTANDLGTSATRTEGLGVIIGNDPKLQLNDSDKVTLDMGA 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 3klk(A) : AHKNQKYRAVILTTEDGVKNYTNDTDAPVAYTDANGDLHFTNTNLDGQQYTAVRGYANPDVTGYLAVWVPAGAADDQDARTAPSD-EAHTTKTAYRSNAALDSNVIYEGFSNFIYWPTTE 
         :                                                                                                                          
 3ttq(A) : AHKNQKYRAVILTTRDGLATFNSD-QAPTAWTNDQGTLTFSNQEINGQDNTQIRGVANPQVSGYLAVWVPVGASDNQDARTAATTTENHDGKVLH-SNAALDSNLIYEGFSNFQPKATTH 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 3klk(A) : SERTNVRIAQNADLFKSWGITTFELAPQYNSSKDGTFLDSIIDNGYAFTDRYDLGMSTPNKYGSDEDLRNALQALHKAGLQAIADWVPDQIYNLPGKEAVTVTRSDDHGTTWEVSPIKNV 
         :                                                                                                                          
 3ttq(A) : DELTNVVIAKNADVFNNWGITSFEMAPQYRSSGDHTFLDSTIDNGYAFTDRYDLGFNTPTKYGTDGDLRATIQALHHANMQVMADVVDNQVYNLPGKEVVSATRAGVYGND-DATGFGTQ 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 3klk(A) : VYITNTIGGGEYQKKYGGEFLDTLQKEYPQLF-----------------SQVYPVTQ---TTIDPSVKIKEWSAKYFNGTNILHRGAGYVLRS-NDGKYYNLGTSTQQFLPSQLSVQDNE 
         :                                                                                                                          
 3ttq(A) : LYVTNSVGGGQYQEKYAGQYLEALKAKYPDLFEGKAYDYWYKNYANDGSNPYYTLSHGDRESIPADVAIKQWSAKYMNGTNVLGNGMGYVLKDWHNGQYFKL****************** 
           ________________________________________________________________________________________________________________________ 

           _________________________________________________________________________________________________________________        
 3klk(A) : GYGFVKEGNNYHYYDENKQMVKDAFIQDSVGNWYYLDKNGNMVANQSPVEISSNGASGTYLFLNNGTSFRSGLVKTDAGTYYYDGDGRMVRNQTVSDGAMTYVLDENGKLVSE        
         :                                                                                                                          
 3ttq(A) : *****************************************************************************************************************        
           _________________________________________________________________________________________________________________        

Morph

Morph animation in progress.
Status: Initialising

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
148.4
Translation
(A)
29.0
Closure
(%)
37.7
Bending Residues
( green )
  786 - 798
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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