Glucosamine-6-Phosphate Deaminase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Glucosamine-6-Phosphate Deaminase
  Conformer 1
(PDB)
1frz (A)
  Conformer 2
(PDB)
1fs6 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 200 0.61   3 - 138   144 - 146   155 - 203   226 - 226   235 - 245
2 62 0.89   139 - 143   147 - 154   204 - 225   227 - 234   246 - 264

Sequence


           ________________________________________________________________________________________________________________________ 
 1frz(A) : MRLIPLTTAEQVGKWAARHIVNRINAFKPTADRPFVLGLPTGGTPMTTYKALVEMHKAGQVSFKHVVTFNMDEYVGLPKEHPESYYSFMHRNFFDHVDIPAENINLLNGNAPDIDAECRQ 
         :                                                                                                                          
 1fs6(A) : MRLIPLTTAEQVGKWAARHIVNRINAFKPTADRPFVLGLPTGGTPMTTYKALVEMHKAGQVSFKHVVTFNMDEYVGLPKEHPESYYSFMHRNFFDHVDIPAENINLLNGNAPDIDAECRQ 
           ________________________________________________________________________________________________________________________ 

           _______________138__143________154______________________________________________203___________________225______234_____2 
 1frz(A) : YEEKIRSYGKIHLFMGGVGNDGHIAFNEPASSLASRTRIKTLTHDTRVANSRFFDNDVNQVPKYALTVGVGTLLDAEEVMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCD 
         :                                                                                                                          
 1fs6(A) : YEEKIRSYGKIHLFMGGVGNDGHIAFNEPASSLASRTRIKTLTHDTRVANSRFFDNDVNQVPKYALTVGVGTLLDAEEVMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCD 
           _______________138__143________154______________________________________________203___________________225______234_____2 

           42________________________                                                                                               
 1frz(A) : EPSTMELKVKTLRYFNELEAENIKGL                                                                                               
         :                                                                                                                          
 1fs6(A) : EPSTMELKVKTLRYFNELEAENIKGL                                                                                               
           42________________________                                                                                               

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
For more advanced options, right click on the model.


Show console


play backwards pause play forwards

Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
6.5
Translation
(A)
-0.4
Closure
(%)
75.8
Bending Residues
( green )
  138 - 139
  143 - 147
  154 - 155
  203 - 204
  225 - 227
  234 - 235
  242 - 246
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

Download and extract PyMOL PML script file Download