Erythronate-4-Phosphate Dehydrogenase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Erythronate-4-Phosphate Dehydrogenase
  Conformer 1
(PDB)
2o4c (B)
  Conformer 2
(PDB)
2o4c (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 268 0.39   89 - 265   286 - 286   289 - 378
2 108 1.2   3 - 88   266 - 285   287 - 288

Sequence


           ______________________________________________________________________________________88________________________________ 
 2o4c(B) : MRILADENIPVVDAFFADQGSIRRLPGRAIDRAALAEVDVLLVRSVTEVSRAALAGSPVRFVGTCTIGTDHLDLDYFAEAGIAWSSAPGCNARGVVDYVLGCLLAMAEVRGADLAERTYG 
         :                                                                                                                          
 2o4c(A) : MRILADENIPVVDAFFADQGSIRRLPGRAIDRAALAEVDVLLVRSVTEVSRAALAGSPVRFVGTCTIGTDHLDLDYFAEAGIAWSSAPGCNARGVVDYVLGCLLAMAEVRGADLAERTYG 
           ______________________________________________________________________________________88________________________________ 

           ________________________________________________________________________________________________________________________ 
 2o4c(B) : VVGAGQVGGRLVEVLRGLGWKVLVCDPPRQAREPDGEFVSLERLLAEADVISLHTPLNRDGEHPTRHLLDEPRLAALRPGTWLVNASRGAVVDNQALRRLLEGGADLEVALDVWEGEPQA 
         :                                                                                                                          
 2o4c(A) : VVGAGQVGGRLVEVLRGLGWKVLVCDPPRQAREPDGEFVSLERLLAEADVISLHTPLNRDGEHPTRHLLDEPRLAALRPGTWLVNASRGAVVDNQALRRLLEGGADLEVALDVWEGEPQA 
           ________________________________________________________________________________________________________________________ 

           __________________261_____________________285___________________________________________________________________________ 
 2o4c(B) : DPELAARCLIATPHIAGYSLEGKLRGTAQIYQAYCAWRGIAERVSLQDVLPETWLAGLQLNPGCDPAWALATLCRAVYDPRSDDAAFRRSLTGDSATRRAAFDALRKHYPPRREITGLRV 
         :                                                                                                                          
 2o4c(A) : DPELAARCLIATPHIAGYSLEGKLRGTAQIYQAYCAWRGIAERVSLQDVLPETWLAGLQLNPGCDPAWALATLCRAVYDPRSDDAAFRRSLTGDSATRRAAFDALRKHYPPRREITGLRV 
           __________________261_____________________285___________________________________________________________________________ 

           ____________________                                                                                                     
 2o4c(B) : ATGGQAELQRVVRALGAQLV                                                                                                     
         :                                                                                                                          
 2o4c(A) : ATGGQAELQRVVRALGAQLV                                                                                                     
           ____________________                                                                                                     

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
11.3
Translation
(A)
0.6
Closure
(%)
51.2
Bending Residues
( green )
  88 - 90
  261 - 266
  285 - 290
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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