Gluxyn-1

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Gluxyn-1
  Conformer 1
(PDB)
1axk (B)
  Conformer 2
(PDB)
1axk (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 205 0.39   3 - 156   341 - 391
2 184 0.3   157 - 340

Sequence


           ________________________________________________________________________________________________________________________ 
 1axk(B) : FDCAEYRSTNIYGYGLYEVSMKPAKNTGIVSSFFTYTGPAHGTQWDEIDIEFLGKDTTKVQFNYYTNGVGGHEKVISLGFDASKGFHTYAFDWQPGYIKWYVDGVLKHTATANIPSTPGK 
         :                                                                                                                          
 1axk(A) : FDCAEYRSTNIYGYGLYEVSMKPAKNTGIVSSFFTYTGPAHGTQWDEIDIEFLGKDTTKVQFNYYTNGVGGHEKVISLGFDASKGFHTYAFDWQPGYIKWYVDGVLKHTATANIPSTPGK 
           ________________________________________________________________________________________________________________________ 

           _________________________________156____________________________________________________________________________________ 
 1axk(B) : IMMNLWNGTGVDDWLGSYNGANPLYAEYDWVKYTSNASTDYWQNWTDGGGIVNAVNGSGGNYSVNWSNTGNFVVGKGWTTGSPFRTINYNAGVWAPNGNGYLTLYGWTRSPLIEYYVVDS 
         :                                                                                                                          
 1axk(A) : IMMNLWNGTGVDDWLGSYNGANPLYAEYDWVKYTSNASTDYWQNWTDGGGIVNAVNGSGGNYSVNWSNTGNFVVGKGWTTGSPFRTINYNAGVWAPNGNGYLTLYGWTRSPLIEYYVVDS 
           _________________________________156____________________________________________________________________________________ 

           ________________________________________________________________________________________________339_____________________ 
 1axk(B) : WGTYRPTGTYKGTVKSDGGTYDIYTTTRYNAPSIDGDRTTFTQYWSVRQSKRPTGSNATITFSNHVNAWKSHGMNLGSNWAYQVMATEGYQSSGSSNVTVWGSVFWEPKSYFNPSTWEKA 
         :                                                                                                                          
 1axk(A) : WGTYRPTGTYKGTVKSDGGTYDIYTTTRYNAPSIDGDRTTFTQYWSVRQSKRPTGSNATITFSNHVNAWKSHGMNLGSNWAYQVMATEGYQSSGSSNVTVWGSVFWEPKSYFNPSTWEKA 
           ________________________________________________________________________________________________339_____________________ 

           __________________________________                                                                                       
 1axk(B) : DGYSNGGVFNCTWRANNVNFTNDGKLKLGLTSSA                                                                                       
         :                                                                                                                          
 1axk(A) : DGYSNGGVFNCTWRANNVNFTNDGKLKLGLTSS*                                                                                       
           __________________________________                                                                                       

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
14.6
Translation
(A)
0.7
Closure
(%)
24.2
Bending Residues
( green )
  156 - 159
  339 - 341
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Mixed

PyMOL Script

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