Adenosylhomocysteinase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Adenosylhomocysteinase
  Conformer 1
(PDB)
3x2e (A)
  Conformer 2
(PDB)
3x2f (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 224 1.0   5 - 176   337 - 388
2 160 0.53   177 - 336

Sequence


           ________________________________________________________________________________________________________________________ 
 3x2e(A) : ANTGEMKINWVSRYMPLLNKIAEEYSREKPLSGFTVGMSIHLEAKTAYLAITLSKLGAKVVITGSNPLSTQDDVAEALRSKGITVYARRTHDESIYRENLMKVLDERPDFIIDDGGDLTV 
         :                                                                                                                          
 3x2f(B) : ANTGEMKINWVSRYMPLLNKIAEEYSREKPLSGFTVGMSIHLEAKTAYLAITLSKLGAKVVITGSNPLSTQDDVAEALRSKGITVYARRTHDESIYRENLMKVLDERPDFIIDDGGDLTV 
           ________________________________________________________________________________________________________________________ 

           ____________________________________________168_________________________________________________________________________ 
 3x2e(A) : ISHTEREEVLENLKGVSEETTTGVRRLKALEETGKLRVPVIAVNDSKMKYLFDNRYGTGQSTWDAIMRNTNLLVAGKNVVVAGYGWCGRGIALRAAGLGARVIVTEVDPVKAVEAIMDGF 
         :                                                                                                                          
 3x2f(B) : ISHTEREEVLENLKGVSEETTTGVRRLKALEETGKLRVPVIAVNDSKMKYLFDNRYGTGQSTWDAIMRNTNLLVAGKNVVVAGYGWCGRGIALRAAGLGARVIVTEVDPVKAVEAIMDGF 
           ____________________________________________168_________________________________________________________________________ 

           ____________________________________________________________________________________________336_________________________ 
 3x2e(A) : TVMPMKEAVKIADFVITASGNTDVLSKEDILSLKDGAVLANAGHFNVEIPVRVLEEIAVEKFEARPNVTGYTLENGKTVFLLAEGRLVNLAAGDGHPVEIMDLSFALQIFAVLYLLENHR 
         :                                                                                                                          
 3x2f(B) : TVMPMKEAVKIADFVITASGNTDVLSKEDILSLKDGAVLANAGHFNVEIPVRVLEEIAVEKFEARPNVTGYTLENGKTVFLLAEGRLVNLAAGDGHPVEIMDLSFALQIFAVLYLLENHR 
           ____________________________________________________________________________________________336_________________________ 

           ____________________________________________                                                                             
 3x2e(A) : KMSPKVYMLPDEIDERVARMKLDSLGVKIDELTEKQRRYLR***                                                                             
         :                                                                                                                          
 3x2f(B) : KMSPKVYMLPDEIDERVARMKLDSLGVKIDELTEKQRRYLRSWQ                                                                             
           ____________________________________________                                                                             

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
14.4
Translation
(A)
-0.8
Closure
(%)
97.6
Bending Residues
( green )
  168 - 183
  336 - 337
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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